Clavelina lepadiformis (light-bulb sea squirt): 143450812
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Entry
143450812 CDS
T11416
Name
(RefSeq) parapinopsin-like isoform X1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clep04030
]
143450812
G protein-coupled receptors [BR:
clep04030
]
Rhodopsin family
Vision
Opsin
143450812
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Str
7TM_GPCR_Sri
DHHC
Motif
Other DBs
NCBI-GeneID:
143450812
NCBI-ProteinID:
XP_076807637
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Position
3:complement(18475199..18480117)
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AA seq
388 aa
AA seq
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MNQWIQSMLGEGQIGIVNDSVAVDVVDYWTYGSDDPLSSTAVAVPAEVPQCKDQNPYVLK
GDGWVPQHIAIADRTVYAYFTIFMVFQFLLSTSLNSIVIVVIYKFEELRQPLNYIIVNLA
LANLLRGGIGGFLSMLSNGAGYFFLGKGMCYAEGYAVSLFGCVGLNLIVVLVIERFLEVC
KPFGSVRMGAKATWASIFVAWAWSFFWNTPFLMLRDGYEPEGLGTTCAPNWFVTGENEKM
FITLYYVCCFLLQYAVMVICYWKLFLTLRELAKETSPESSSPETEVMKMVVASVSAFFVS
WLPYAAFVMYSVVNHTAQISYESGAITALLAKTTTICNPLIYIGLSRHFRDCVIRTFFAG
RNPWSDDLSASSMMSMASSQMSSKVGPA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtggattcaaagcatgcttggtgaaggacaaatcggaattgtaaatgattct
gttgcagttgatgtcgttgattactggacgtacggctcggatgatccgctttcttcaact
gctgtggcagtaccagctgaagtaccccaatgtaaagatcagaatccttacgtgctgaaa
ggggatggttgggttccacagcacatcgcgattgctgacagaaccgtttatgcatatttt
actatcttcatggtatttcaatttctattatccacctcactcaacagcattgtaatcgtg
gtgatttataaattcgaggagttaagacagcctctcaactatatcatcgtaaatcttgcc
ctagctaatttactgcgtgggggtattgggggtttcttgtcaatgttatccaatggcgca
ggttacttctttttgggaaaagggatgtgttatgctgaaggatacgccgtgtccctattt
ggctgcgttggactgaatttgatagtggtattagttatcgaacgttttttggaggtttgt
aaaccattcggatctgtcagaatgggagcaaaagcaacttgggcaagcatttttgttgcc
tgggcgtggtctttcttttggaatacaccattcctgatgttgcgggatggatacgagccc
gaaggtttgggaacaacttgtgcacccaactggtttgtaacaggagaaaatgaaaaaatg
ttcattaccctatactacgtttgctgctttttgcttcagtacgctgttatggttatttgt
tactggaaactttttttaacactacgcgagctagccaaggaaacttcgccagaaagttca
agtccagaaacagaagtgatgaaaatggttgttgcttctgtgtcagctttctttgtaagt
tggctgccgtatgctgccttcgtgatgtacagtgtcgtcaatcatacagcccagattagt
tacgaatcgggtgctattacggcacttttggccaaaacgacaaccatttgtaatccattg
atttacattgggctcagtcgtcattttcgagattgtgtaatcagaacatttttcgccggg
cgaaacccatggagtgatgacttgtcagccagcagtatgatgagtatggcctcatcacag
atgagcagcaaggtcggaccagcataa
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