Clavelina lepadiformis (light-bulb sea squirt): 143451275
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Entry
143451275 CDS
T11416
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143451275
04121 Ubiquitin system [BR:
clep04121
]
143451275
Enzymes [BR:
clep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
143451275
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143451275
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
143451275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143451275
NCBI-ProteinID:
XP_076807829
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Position
4:complement(16676199..16687334)
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AA seq
761 aa
AA seq
DB search
MENSFNNLGISSNLVQSLTDISLTSSHTAPVSPVNAFNSNPFSQNDFGLSQSAFMGLGSS
HDIPNSTDVSFSTALIGNILGSVNLQDDLKRPNSKKNTCSCDDQIVAEYFCHECNDHLCQ
KCVSAHHRVRLTKDHKIFKSSDFLDTDSVTSLPYLLSPPSETASNYCSTHANEVLHLFCD
TCSAAVCSQCTFHDHSGHSLQYLNQVVEGSKTVTMSLLTDAKNSLQGLENSIGDIKRMRE
SIFNRSKVVESEIHSVMQKHRAALDQRERDLVRRVEQIRLFKSRTLGAQMESLRLSARKL
KIIIEDVNRTLSSGNNIEILKAKEKMQAGVNACQSNIILAEDECLIFSPPESSHFLALNN
IGNVRSSICAQQSVLIKDGNSSNNSLSGSLVSFTILARDHTGEAKVAGGDLLEVKIEKPD
NNVFMLDAMDNGDGRYIFQLQVTQDGDYVISVKYRGIHVCKSPYILNVKPCVNYAARAAT
CMPIFTFGKEGDKPGELCRPWGICSDAQGNFIVADRSNNRIQIFKPDGNFHLMFGTSGTR
PGQFDRPAGVAVDKKERIIVADKDNHRIQIFTFDGSFISTFGERGSKNGQFNYPWDVAAN
SAGVIAVTDTRNHRIQVFTSDGSFISKYGFEGAMWKHFDSPRGITFTNENQLVVTDFNNH
RLVTIQPDMQSARFLGSEGSQTLQFLRPQGVAVDEEGNIVVADSRNHRLQVFTSSGQLLA
VFGGIVHSEHAMQMDRPSGITVTPDGRIAVVDFGNNRIMVY
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcattcaacaatttgggcatatcatcgaatttagtacaaagtttaacagat
atctccttaacatccagtcatactgctccggtatcaccggtaaatgcttttaatagcaac
cctttttcccaaaatgactttggcctttcacaaagtgcatttatgggtttgggatcgtct
catgacatacctaattctactgacgtttcattttctaccgcacttattggaaatatactg
ggttccgtgaatttacaagatgacctaaaaaggccaaattcaaagaagaacacttgcagc
tgtgacgatcaaattgtggcagaatacttttgccatgaatgtaatgaccatctttgccaa
aagtgtgtctcggcacaccacagagtccgcctcactaaagatcacaaaatattcaagtct
tctgattttttggatactgactccgttacttcgctgccatatctgctatctcctccaagt
gaaacagccagcaactactgttccacacatgctaatgaagttctacatttgttttgtgac
acttgttccgctgctgtttgctcccaatgcacttttcatgatcacagtggtcatagtttg
cagtacctcaatcaagttgtggagggcagtaaaactgtcactatgtctctactcactgat
gccaaaaatagccttcaaggtctggaaaatagcattggtgacatcaaaagaatgcgtgaa
agtattttcaatcgcagcaaagttgtggaatctgaaattcattctgttatgcaaaaacat
agggctgctcttgaccaaagagaaagagatttggtcagaagggttgagcaaataagactg
tttaaaagtcggactttgggtgctcaaatggaatcccttcgattgtcagcgagaaaacta
aaaattataattgaagatgttaatagaaccctatcgtcgggaaataacatcgagatatta
aaagcaaaagagaagatgcaagccggtgtcaatgcatgccaaagtaacattattttggcc
gaagatgaatgcctaattttctcgccacccgaatcttcacattttttggctttaaataat
ataggaaacgtaagaagctccatctgtgctcaacaatctgtattaatcaaagatggaaat
tcatcaaacaattctttgtcaggaagcttagtttcatttacaatattggctcgcgatcac
actggagaggcaaaggttgctggtggagatcttttagaggtgaagattgaaaaaccagat
aataatgtgtttatgttggatgcaatggacaacggtgatggtcgctacatatttcagtta
caagtcacccaggatggggattatgtgatttccgtgaaatatcggggcattcatgtttgt
aaaagtccatacattttaaatgtcaaaccatgtgtaaattatgccgctcgtgctgcaacc
tgcatgcctatttttacattcggaaaggagggagataagccaggagagctgtgtagacca
tgggggatctgttctgatgctcaaggcaactttattgttgctgacagaagcaacaaccgg
atacaaatatttaaacctgatggaaactttcatctcatgtttggtacttctgggacacgt
ccaggtcaatttgaccggccggctggtgttgcagtggacaagaaagagcgtattattgtt
gccgataaggataatcacagaattcagatttttacttttgacggatcttttatatctacc
tttggagaacgtgggtcaaaaaatggacagttcaattacccatgggatgttgctgcaaat
agtgctggtgttattgctgtaacagatacaaggaatcacaggattcaagtatttactagt
gatggttcttttatcagcaagtatggctttgaaggagcaatgtggaaacattttgattca
ccaaggggaattactttcaccaatgaaaatcaactggttgtaaccgactttaataatcac
agattggttacaattcaaccagatatgcaatctgctagatttcttggttcagaaggtagc
caaaccttgcaattccttcgacctcagggagttgcggttgatgaagagggtaacattgtt
gttgccgattcgagaaatcaccgtttgcaagtttttacgtcatcgggtcaattacttgct
gtgtttggcggtatagtgcacagtgaacatgcaatgcaaatggaccgaccttctggaatt
acggtgacacctgatggtcgtatagctgttgttgactttggaaataatcgcataatggta
tattaa
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