Clavelina lepadiformis (light-bulb sea squirt): 143451311
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Entry
143451311 CDS
T11416
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clep03021
]
143451311
Transcription machinery [BR:
clep03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
143451311
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GFIT
Motif
Pfam:
RRN3
PrlF_antitoxin
HEAT_GCN1_fung
Motif
Other DBs
NCBI-GeneID:
143451311
NCBI-ProteinID:
XP_076807882
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Position
4:18001127..18009748
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AA seq
587 aa
AA seq
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MSRKSLLRTPSQSKSVRFGGNVKNILHEFNEGFKENYQLLLNQLKDPTLKSSQILEWLKE
CIACIHLMDRSHAEIVNVLLKVRWMERESEVVSKFSSFLVTLITTNPVHLRAVIKSLTSS
FVLDLSRSSDTSFPQKNEKLVFSTLHHVLKTLFTLIPQSKSTAELIFGESFPYMRKPITS
LKSYTQNILHVTNYQPDLRPRVLELILRNLIDLDVHSPRQEILEQEEVDDHEDDENEQVF
QMDEDLKEKANACSEMKHPLANRLDTLMHMLLQYIYDTCYDGGELQVENARKLFREIIYL
FDDIILPIHLLVHVQYIVFYICSFKQSFHESFIEHCWKKVTNVNNPSILRQSAVCYIASL
LARANYVSLSAVKACIDTMTTWAHRYLNECTDILSCTSYCCDITRHGTFYSVCQAIFYII
VFRHKQILQSKLGYHYLQSLNLQHLIVSPLNPLKACLSSVVSIFSSTMRQHQIVYCDTIV
ERNNRQMLPIVGVPSISTNNPLESFFPFDPCLLKRSISFIQPHYKEWDGRSPESQPQDAE
GLKDDEFLEEIEMSLHDSESFPFGSLPKQITPSPISSGFGLITPSPF
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaaaatcattgttaaggactccctcgcaaagcaagagtgttcgatttggcgga
aatgtaaaaaatattttgcatgaatttaatgaggggttcaaagagaattatcaactgttg
ctgaatcagttaaaagatcccacattaaagtctagtcaaattttggaatggcttaaagag
tgcattgcatgtattcatttaatggatcgatctcatgctgaaatcgttaacgtcctgttg
aaagttcgttggatggaaagagaatcagaagttgtttcaaaattcagctcatttttagtt
acccttattactactaatcctgttcacctgcgtgcagttataaaaagcttgacaagcagt
tttgttttggacttgtctcgctcttctgatacatcttttccccaaaagaatgaaaaactt
gtcttttctacattgcatcatgttttgaaaacattatttacattaatacctcagtcgaaa
tctactgccgagctcatatttggagaatcgtttccttatatgagaaaaccaattacatca
ttaaagtcatacacccaaaatatactccatgtaacaaactaccaaccagatctacgacca
cgtgttttggagcttattttaagaaatttgatcgacttggatgtgcattccccgaggcag
gaaatcttagaacaagaagaagttgatgatcacgaagatgacgaaaatgaacaagttttt
caaatggatgaagatttaaaagaaaaggcgaacgcatgctctgaaatgaagcaccccctt
gccaacagacttgatacgttgatgcatatgttattgcaatatatctatgacacttgttat
gatggcggcgagctgcaagttgagaatgccagaaaattatttcgtgaaattatttattta
tttgatgatattatcctgccgattcatctacttgttcatgttcagtatattgttttctac
atatgcagttttaaacagagctttcatgaatcttttattgaacactgctggaaaaaggtg
accaacgttaataacccttcaattttgcgacaatctgctgtatgttacatagccagcttg
ttggcgagagcaaattacgtttcattaagtgctgtgaaagcctgcatcgacacaatgacc
acatgggctcaccgctacttgaacgaatgcacagacattctgtcatgtacctcatattgc
tgtgatattacccggcatggaacattttacagtgtctgtcaagctattttttacataatt
gttttcagacacaagcaaattttacaatctaaattaggttaccattaccttcagtcatta
aatctacaacatttaatagtgagccctcttaatccattaaaagcttgcttgtcttcggtg
gttagcatattttcttcaaccatgagacagcatcagattgtatactgtgacacaatagtg
gagcgcaacaatcgccaaatgctgccaatagttggagttccatcaatttcaacaaacaat
ccactggagtcattttttccttttgacccgtgtcttttaaaacggtccatatccttcatt
caacctcactacaaagagtgggatggaaggagccctgaatcgcagccacaggacgccgag
ggtttgaaagatgatgaatttctggaagaaattgaaatgagtcttcacgactcggaatct
tttccgttcggttcattacccaaacagatcaccccttcccccatttcaagtggttttggc
ttaataacaccttcacccttctga
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