Clavelina lepadiformis (light-bulb sea squirt): 143451601
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Entry
143451601 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143451601 isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143451601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143451601
03016 Transfer RNA biogenesis [BR:
clep03016
]
143451601
Enzymes [BR:
clep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
143451601
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
143451601
Transfer RNA biogenesis [BR:
clep03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
143451601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143451601
NCBI-ProteinID:
XP_076808412
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Position
4:complement(10372281..10390015)
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AA seq
704 aa
AA seq
DB search
MGRYHRWQQTKTQKSVPNLMNVLQTIQGVANLKLGCNLCPQFIGSHFNSSVVSQTTNNRL
QMRGHTETDFIPFKNADNSPSCKKKATLAKYDGSVSPPHGGKKRRENHGNLNQQLMRHNC
VMNLPQPAWVLRNYCPGMVGLHDEIEDFYNYIRPTEEEKCMREHVIKSVKDIVLQLWPTA
ELDVFGSFPTNLYLPTSDIDIVLFGKWKFLPLWELKEELVGKGIADEHSVKVLDRAAVPI
IKFRHPGTGVKVDISFNMKSGVQSVQLIKDYMEKYPTLPKLIFVLKQFLVMRDLNEVWTG
GVSSYSLILLCVSFLQLHWRSDAAYPDANLGVLLIEFFELYGKHFNFQNACISVKGNGGL
ISKEEFRQQLDNGSAPSLLSIEDPLTPGNDLGRGSYCLLQVRNAFNHAYLTLTSALYKQR
EYSDYQPVSLLSLIIQISLDIIELRSVVRNRRQLYLSTSSIALVSSDLPHPPRCSTGSSE
CSNASSSDEVNAPSSEDYISSYSVDSETDYHTNRASVRKCHVNTAKRNMPAQRAKSADCL
RVQKGFSANTVFSQVKNPSRTHSADRKKTIPRKGAHTSSFVAISPRCTDSKSTLISMEAS
EKSETHLTYSNAVKLKAAPGKKAAKANIDQQPNDVTKVENYVKKDFSKAIICNSNKNHKQ
QTRTYRRNLCSQKNNGRNLCGIYGHSFNPSTKSLNSSDKLRSGR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttatcataggtggcagcaaacaaaaacacaaaaaagtgtacccaatttgatg
aatgttttgcaaacaattcagggtgtagcaaacttgaaacttggttgcaatttatgtccc
cagtttataggcagtcattttaatagcagtgttgtcagtcaaactaccaataacaggctt
caaatgcgtggtcataccgagacagacttcattcctttcaaaaatgcagacaactctcca
tcatgcaaaaagaaggcaacactggcaaaatatgacggctctgtttccccaccacatgga
ggaaaaaaaaggagagagaatcacggtaacttgaatcaacagcttatgcgacataactgt
gtgatgaaccttccacaacctgcatgggtgttgagaaactattgtcctggaatggttggt
ctacatgatgaaatagaagatttttacaactacatacgacccactgaagaagaaaaatgc
atgagagagcatgtcattaaatcagttaaagatattgtacttcagctatggcctacagca
gagcttgatgtgttcggaagttttccaacaaatctctatttaccaacaagcgacattgac
atcgtgctctttggtaaatggaaatttttgccattgtgggaattaaaagaagagcttgtc
ggtaaaggaattgctgatgaacactctgtaaaggtgcttgacagggcagctgtccccatc
atcaaatttcgacaccctggcactggtgtgaaagtggacattagctttaatatgaaaagc
ggagtgcaaagtgttcagctcatcaaggactatatggaaaaatatccaactcttccaaaa
ctaatctttgttttaaaacaatttcttgtcatgcgcgacttaaatgaagtttggactggt
ggtgtgagctcctattcattaattcttctttgtgtgagctttttgcagctacattggaga
tccgatgcagcttaccccgatgccaatcttggagtgttattgattgaattttttgagctg
tatggaaaacatttcaacttccagaatgcttgcattagtgtaaagggcaatggtggttta
atcagcaaagaggagtttcggcagcagttggacaatggctctgctccatcacttctttca
atcgaagatcctttgacaccaggtaatgacctggggcgtgggtcctattgcttgttacaa
gttcgaaatgcattcaatcatgcatatttaactcttacctcagctttatacaagcaacgt
gaatactcagattaccagcctgttagccttttaagtttgatcattcaaatatctttggat
ataattgagttacgctctgttgtaagaaacagaaggcaactatatttgtccacttcttcc
attgcattggtctcaagcgatttaccgcatccaccaagatgctcaactggttcctctgaa
tgcagtaatgcttcaagttcagacgaggtaaatgctccatcatctgaggactacatatct
tcgtattctgttgactcggaaacagattaccataccaatcgtgcttctgtaagaaagtgc
catgtgaacactgctaaacgcaatatgcctgcacaacgtgccaaatctgcagattgtcta
cgggtgcaaaaaggattttcagcaaacactgtcttttcacaagtgaaaaatccaagcaga
actcattctgcagatagaaaaaaaacaataccaagaaaaggtgcacatacttcatcattt
gttgccattagcccgagatgtacagattcaaaaagtaccttgatttcaatggaagcttca
gagaagagtgaaacacatctaacatattctaatgcagtaaaactcaaagcagcaccaggc
aaaaaagctgctaaagccaatatagaccagcagcctaatgacgttactaaagttgaaaat
tatgtcaagaaagatttttcaaaggcaatcatttgcaactcaaacaaaaatcataagcaa
caaacaaggacctatcgcaggaatctttgtagtcagaaaaataatggtagaaatctttgc
ggaatatatggacactctttcaatccttcaaccaaatctttgaattcctctgacaagttg
cgctctggcagatag
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