KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143451662
Entry
143451662         CDS       T11416                                 
Name
(RefSeq) ATP-binding cassette sub-family C member 4-like isoform X1
  KO
K05673  ATP-binding cassette, subfamily C (CFTR/MRP), member 4
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep02010  ABC transporters
clep04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:clep00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    143451662
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    143451662
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:clep02000]
    143451662
Transporters [BR:clep02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    143451662
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_21 AAA_29 AAA_16 MMR_HSR1 AAA_22 NB-ARC AAA_23 RsgA_GTPase cobW DO-GTPase2 GTP_EFTU DUF87 AAA_30 ABC_ATPase T2SSE nSTAND3 nSTAND_NTPase5 AAA_19 TsaE AAA RuvB_N MeaB PduV-EutP FKBP_N_2 NACHT
Other DBs
NCBI-GeneID: 143451662
NCBI-ProteinID: XP_076808480
LinkDB
Position
4:6033852..6050047
AA seq 1390 aa
MSAARSDMDSKEPYNLKPSAYERSNIFARLFVSWINPVLATGNKRKLNDSDLFEVAKEHK
SSYLCEKLEKNWNLELERAKRKNIKPSLVRTFFKTYLVKVVAISIFILLGEACRITGPIL
IGELTGYLNNFDTLPAWRGYAFASGLAGVVLITPFCFQSYFLIVQILGWNIRTAMVALMY
KKTLRLNYAALLQTSTGHIVNLSATDVLRFDYTFAFVHYLWAAPLEAAVVVYILWLRLGP
SPLAGVSVFFVLMILQSLSGRLFGALRFKAAHWTDERISLMSEIISGMRIIKMYSWEKSF
FELAKYLRTREIRKILQASLLRSFNQSSAYAASQVLTFTTFMVYIALGGSLTTETLFVAI
GLFSAIRFAVGFFFPTSVEKLAETITVLRRIEKFLLLPEKDFYPDQVTDINGKGEKFVEL
INFTGSWEEDNALAPAITDISMRANQGKLMIVIGPVGSGKTTLLSAILGELLTINGQANI
RGKIGYCSQVAWLFSATIRENILFGEEFNEQRYQEVVEACALKRDFEILSNGDFTLVGER
GITLSGGQKARINLARLAYRSNLDIVLLDDPLSAVDPSVADHLFNKCICGYLKDKIRILV
THQLQFLENADELLILKEGKVIEKGKYNELIRKGTSFASYVTLESDLKNVGDEKMIKKSR
RPSALFLKPLIRRQSSVSSLNPAYTENELLSASSAFSFDFNFPGIFEADESEMPFSQQVA
NSNSNQNNKNVVTKDKSETEGKDKIKKVSLKIYYEYFVKGVNVFYFVIFLVICMGNHVLL
IMSDWWITNWASTEEQFEKLVRDNITNVNMFTNSSLYANSSMATPTVMAKLVFFQNRQYY
VIVYSILTPGFIITIFVRCAMHFYLCISANSKLHTGMLTSIFKAKIRFFDVNPVGSVLNR
FSKDLGQVDELLPYTTLDFLFYAGSFLTIIIFVVSINYFVIIIVVPMLIYCIWIRTYFVR
CSREIKRIEGAYRSPVFGHLSNTLQGLVTIRSFGMEERATEMYHHLQDLHGAAWFLFLSV
TRWVGFRLDLVSSIFVIAVAFFAVVLVSVLPDTSPLNASNIGLTLAYSINLLSLFQWMIR
QSAEAENLMTSVERIYEYHNLTPEVPENAEKKEPPSGWPQSGAITMKNVDYAHFQDGPCV
LKSLNLEFNAKEKVGIVGRTGAGKSSLIAVLFRMSDQISGKVSIDGIDTSEIELDGLRAS
LAIIPQDPVLFGGTMRRNLDVFSTYTDDQLWNALEKVQLKSVVESLPLKLETELAESGSN
FSVGQRQLVCLARAILRNNRILIIDEATANVDLRTDRFIQETIRKEFSECTVLTIAHRLN
TIIDSDRILVLDAGEAIEFDKPHILLQDKNGLFNEMVGMTGTQEKELRTLAEKAYHACTV
IKESNDEEEK
NT seq 4173 nt   +upstreamnt  +downstreamnt
atgagtgcagctagaagtgacatggattcaaaggagccttataatctgaagccaagtgct
tatgaaagatctaatatttttgcccgactttttgtgagttggattaatcctgttctggca
actggtaacaaaagaaagttgaatgattcagacttatttgaagtggctaaggaacacaag
tcatcatatttgtgtgaaaaattagaaaaaaactggaatcttgaactagaaagagcaaag
agaaaaaatattaaaccgagtcttgttcgaacattttttaaaacttacctagttaaagtc
gttgcaattagcatctttatattgttaggggaagcttgtagaataacaggaccaattctg
attggagaactaacaggatatctcaataactttgacacattaccggcatggaggggttat
gcttttgccagtggccttgctggtgtcgttttgataacaccattttgctttcagtcttac
tttctcattgttcaaatacttggttggaatatacgcactgctatggtagcactcatgtac
aaaaaaacattaaggctgaactatgcagcattgctgcaaactagtacaggtcacattgtt
aacctttcagcaactgatgtgttgagatttgactatacatttgcttttgtgcattacttg
tgggctgcacccttagaagcagctgttgtagtctacatcttgtggttgagattaggacca
tcgccattagccggggtctcagttttctttgttttgatgatattacaaagcctaagtgga
agactttttggagcattaagatttaaggctgctcactggactgatgaaagaatttcactt
atgagcgaaataatttcgggaatgagaatcattaaaatgtattcttgggaaaagtctttc
tttgaactcgccaagtatttaagaacgagagaaatacgaaaaattttgcaagcatcttta
ctgagatcatttaaccagagttctgcgtatgctgcaagccaagtactcacttttaccact
tttatggtctatattgccttgggtggctcacttaccacagaaactctgtttgtggcaatt
ggattgttttctgcaattcgatttgctgttggctttttctttccaacaagtgttgaaaaa
cttgcggagacgataaccgtgttacgcaggatagagaaatttcttcttcttccggaaaaa
gatttttatcctgaccaagttactgacattaatgggaaaggggaaaagtttgttgaatta
atcaatttcactggctcctgggaagaggacaacgcattggcaccagcaattactgacatt
tccatgagagcaaatcaaggcaaactgatgattgttattgggccagttggttctggaaag
actactttgctgagtgctatattgggagaattgcttacgattaatggacaagccaatatc
cgtggcaaaattggttactgcagtcaagtggcgtggctgttctctgcaacaattcgtgaa
aatattttatttggagaagaatttaatgagcaacgctaccaagaagtggtggaagcctgt
gcattgaagagggattttgaaattctttcaaatggcgatttcaccttggttggagagaga
ggcattacattgagcgggggccagaaagctcgtattaacctggccagattggcttatcga
tccaatctggacatcgtgttattggacgatccactcagcgccgtcgacccatcagtggct
gaccatctgtttaataaatgcatttgtggatatttgaaggacaagattcgaattttggta
acacatcaactgcagtttttggaaaatgctgatgagcttttaattttaaaagagggcaag
gtgatcgaaaagggaaaatacaatgaattgataagaaagggaaccagttttgcttcatat
gtaacactagaatcagatttaaaaaacgttggtgatgaaaagatgataaagaagtcacga
agaccatcagctttgtttctgaaaccactgataaggcgtcaatcttctgtttcttcatta
aatcctgcatacactgaaaacgaactgctgtccgcttcgtcagcatttagctttgacttc
aattttcctggcatatttgaggcagatgagtctgaaatgcctttttcacaacaagttgct
aatagcaacagcaatcaaaataacaaaaacgttgtcacaaaagacaagtctgaaactgaa
gggaaagataaaataaaaaaagtttcattaaaaatctattatgaatacttcgtaaaaggg
gtcaatgttttctactttgtcatatttctggtcatttgtatggggaatcatgttctgcta
attatgtcagattggtggataaccaactgggcctctactgaagaacaatttgagaaatta
gtcagggacaatataaccaatgttaatatgttcacaaactcgtcattatatgcaaacagc
agcatggccactcctacggtcatggctaagctagttttcttccaaaatcgacaatattat
gtcattgtttactcaattttgactcctgggtttatcataacaatatttgtaagatgtgcc
atgcatttctatttatgtatttctgccaattctaaacttcacactggaatgctcacttca
atttttaaagctaagataaggttctttgatgtcaatccagttggcagcgttctgaatcga
ttctcaaaagatttggggcaagtggatgaattattgccctataccaccttagattttttg
ttttatgcagggtcctttttaacaatcatcattttcgttgtttcaatcaattactttgtt
atcatcattgttgttccaatgcttatttactgcatctggattaggacctactttgtacgc
tgttcaagagaaattaaaagaattgaaggagcctatcgtagtccagtgtttggtcatttg
tcaaatacattgcaaggtttggtcactattcgatcatttggcatggaagaaagagcaaca
gaaatgtatcatcatctgcaggatttacatggcgctgcttggtttttgtttttatctgtg
acgcgttgggtgggttttcgtcttgacttggtctcaagtatttttgtgattgctgtcgca
ttctttgctgtggtgttggtatcagttctgccggatacatctccacttaatgccagtaac
attggattaactttggcttactcaataaatttactctcactctttcagtggatgattcgt
caaagcgctgaagctgaaaatttgatgacatccgttgaaagaatttacgagtatcataac
ttaacaccggaagtcccagaaaatgccgaaaaaaaggagccacctagtggctggcctcaa
agtggtgcgatcactatgaaaaatgttgattatgctcattttcaagatggtccttgcgtt
ttgaaaagtcttaatcttgagtttaatgcaaaggagaaggtcggaatagttggtcggact
ggggcagggaagagttcccttattgctgttctattcagaatgtcagaccaaatcagtggg
aaagtctccatcgatggaattgatacttcggaaattgaacttgacggactgagggcatct
cttgctattattcctcaagatcctgtacttttcggtggaaccatgcgcaggaatcttgat
gtattttcaacatacactgatgatcaactgtggaatgctttagaaaaggttcagttaaaa
tcagttgttgaaagtcttccattgaaacttgagacagagcttgctgagtcaggatcaaat
ttcagtgttggacagcgccagttggtctgtcttgcaagggctattttacgtaacaatcgc
attttaatcatcgatgaagcgacagccaacgttgatttgagaaccgatcgctttattcag
gaaaccataaggaaagagttttcagaatgtacagttctgacaattgcccacagattgaat
acgattatcgattcggacagaatactggtgctagatgccggtgaagccatcgagtttgac
aaacctcacattctccttcaagacaaaaatggtctctttaatgaaatggtaggaatgacc
ggcacacaggaaaaagagcttcgaacgcttgctgaaaaagcttaccatgcctgtacagta
atcaaagaaagtaatgatgaagaagaaaaataa

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