Clavelina lepadiformis (light-bulb sea squirt): 143451692
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Entry
143451692 CDS
T11416
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143451692
04121 Ubiquitin system [BR:
clep04121
]
143451692
Transcription factors [BR:
clep03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
143451692
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
143451692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
DUF8247
DUF659
DSPn
FAM200-ZBED5_RNase-like
Motif
Other DBs
NCBI-GeneID:
143451692
NCBI-ProteinID:
XP_076808523
LinkDB
All DBs
Position
4:complement(24194490..24196233)
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AA seq
485 aa
AA seq
DB search
MEEEMRREIARLSNVYLTIDLWTNRNMTSFLGITMHFVDAEWKLRSFVLAVDSFLGRHTA
ENIAEAYDNVIEKFRFTTKVKKVVSDNASSMIKAFQVSLPEFTLHKTGEEINEDNEKQLN
PDPEQEMSEEGADLHALLTYLPERVSCFAHTQQLCIKDCLQHSEFAKSYGGKQLGKVAKI
VNSVRKSVKATSYLQRKKITLRAQNVTRWNSQLIMLQSVLKDHEEVNAALTLIQSREKIT
NQDYLALNELVSVLLPFKEAMQQVEGENIVTSSCICPVVLGLLKAMELLKNSNLHYCQKL
AANLKDSVSKRLLPYINSPDNRLASLLDPRFKNSWIEDDVEKEEAICLLKTHVASRLGKD
DEESCSKEDENPAKKPKLFNFMAEGLKKKRPRNSISEVDSYLGLETMHFDEDPLMYWKKK
SEELPTLFTLAKDYLGLTATSAPSERIFSIAGNFYTARRNLLGPETFRTLMFIKCNPTVF
EQVKM
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagatgagacgtgaaattgcacgtttgtcaaatgtttacttgacaattgat
ctctggactaaccgcaacatgacaagtttcttgggcatcactatgcattttgttgatgca
gaatggaagctacgcagctttgtcctggcagtggactcatttttaggacggcatacagct
gaaaacattgctgaggcttatgacaacgtaatagaaaagtttagatttacaacaaaagta
aaaaaggttgtgtcagacaatgcttcctccatgataaaagcatttcaggtttcccttcct
gagttcacactgcataaaactggtgaagaaatcaatgaggacaatgagaaacagttgaat
cctgatcctgaacaagaaatgtccgaggagggtgctgatttacatgctcttctcacttac
ttaccagaaagagtaagctgttttgctcatacacaacaactttgtattaaggattgtctg
caacattcggagtttgctaagtcttacggtgggaagcagctgggaaaggtggccaaaatt
gtaaattcagtaagaaaatctgtaaaagctacctcttatttgcaacgtaaaaaaataacg
ttaagagcacagaatgtgacaagatggaattcgcagcttattatgttgcaaagtgtctta
aaggatcacgaagaagttaacgcggctctcaccttgatccagtcacgggaaaaaataaca
aatcaagattatttggcattgaatgagctcgtgagtgtactactgcctttcaaggaagca
atgcagcaagttgaaggagaaaatattgtaacatcctcttgcatttgtccggtagtgctt
ggcttactgaaagcaatggaactactaaaaaactcaaatctccactattgccagaaactg
gcagctaatcttaaagactctgtttctaaaaggttgttgccatatataaattctccggac
aacagacttgcatctcttcttgatccacgatttaaaaacagctggattgaagatgacgtt
gaaaaagaagaagcaatatgtttgctaaaaactcatgtggcaagtagacttggcaaggat
gacgaagagagttgtagcaaagaggacgaaaaccctgcaaaaaaaccaaagctatttaac
tttatggcagaaggcttaaaaaagaaaagaccgagaaattcaataagtgaagtcgacagc
tatttggggttagaaaccatgcatttcgatgaagacccactaatgtattggaagaagaag
tcagaagaacttcccacgctttttactttagccaaggattatttgggactaacagcaaca
tcagccccgtcagaaagaatattttcaattgcgggtaacttttatacggcaagaagaaat
ttactggggccagaaacttttcgcaccctaatgttcatcaaatgcaatccaacagttttt
gagcaagtgaaaatgtaa
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