Clavelina lepadiformis (light-bulb sea squirt): 143452016
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Entry
143452016 CDS
T11416
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
143452016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clep03021
]
143452016
03036 Chromosome and associated proteins [BR:
clep03036
]
143452016
Transcription machinery [BR:
clep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
143452016
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
143452016
PBAF complex
143452016
GBAF(ncBAF) complex
143452016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
143452016
NCBI-ProteinID:
XP_076808979
LinkDB
All DBs
Position
1:complement(11854740..11861335)
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AA seq
460 aa
AA seq
DB search
MMNQQPRPPYHAQPSPYYGSRVRTGGVPSPYMQSRAVVDPSRKRPTSHAGSPAAPVPGSS
DMRSKQPIQKKKKLSDKILPQSVRDLVPESQAYMDLLSFERKLDSTIMRKRLDIQEALKR
PVKVKRKLRVFISNQYCPAKSDADPKDDSAKASWELRVEGRLLDDPAHGSREGQKQKRKF
SSFFKSLVIELDKDLYGPDNHLVEWHRTSNTQETDGFQVKRHGDKNVRCTMLFMLNYLPP
QFKLDGRLARLLGIHTQSRPVIIQALWQYIKTHKLQDDHEREFINCDPYLEQILGRPRIR
FAEIPTLLQPLLQPPDPIVIQHVISVDSAKKQACYDIEVELDDTLKAQMSSFLLSSSSQQ
DIADLERRIHDTVATIKQHRIQKEFYLGFSESPQEFISDWISSQTRDLKTMTDITGNKEE
ERLADYYYSPWSQEAVSRYFYSKVQQRRLELEQAIKSSNM
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcagcaaccaagaccaccgtaccatgctcagccatcgccttattatggtagc
cgtgtgagaacaggtggtgtgccatcaccatacatgcaatctcgtgctgttgtggatcca
tcaaggaaacggccaacatctcatgctggttcacctgctgcacctgttcctggatcaagt
gacatgagaagtaagcagccgatacagaagaaaaagaaactctctgacaaaattctgcca
cagtctgtaagagacctcgtgccggaatctcaagcatacatggacctactttcatttgaa
cgaaaattggattctacaatcatgcgtaaacgacttgatatacaagaagctcttaagcgt
ccagtaaaagtgaagcgcaaactcagggtattcatttctaaccaatattgtcctgcaaaa
tctgatgctgatcccaaagacgatagcgcaaaagcttcatgggaacttcgtgttgaagga
aggctgctagatgatccggcacatggtagtcgtgaagggcagaagcaaaaacgcaaattt
tcttcatttttcaagagccttgtcatcgagctagataaagacttatatggcccagataat
catttagttgaatggcatcgcacttccaatacccaagaaactgatgggttccaagtgaag
cgtcatggagataaaaatgttcgctgtactatgctattcatgctcaattatttgcccccc
caattcaagcttgatggtcgccttgctcgacttctaggaatccatacacagtctcgtcca
gttatcattcaagctctatggcagtacattaaaactcacaagttacaagatgaccatgag
cgagagttcattaattgtgatccatatttggagcagattttgggaagaccaagaattaga
ttcgctgagatccccacattattgcagcctttgctccagcctccagatcctattgttatt
caacacgttataagtgtggactcagcaaaaaagcaggcttgctatgacattgaagtggaa
ttggatgatacgttaaaagcccaaatgagctcatttcttttatcatcgtctagtcaacag
gatatagctgacttggaacgtcggatccatgatacggttgcaacgatcaagcagcaccgc
attcagaaagaattctatctgggattctcagaaagtccacaggagttcatttctgattgg
atttcgtctcaaactagagatcttaaaaccatgactgacataaccgggaacaaagaagag
gaaaggctggcagattactattactccccctggtctcaggaagctgtgtcaagatatttt
tactccaaagtgcaacaacgtcgtttggagttggaacaagccattaaaagctcgaacatg
tga
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