Clavelina lepadiformis (light-bulb sea squirt): 143452654
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Entry
143452654 CDS
T11416
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143452654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143452654
Membrane trafficking [BR:
clep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
143452654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Peptidase_C23
Motif
Other DBs
NCBI-GeneID:
143452654
NCBI-ProteinID:
XP_076809816
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Position
4:16446681..16454421
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AA seq
796 aa
AA seq
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MAEKNVENTEEQERLLDEALQVVKMESFHMKRELDKNKLMDGLKHASDLLKELRTSALTP
KNYYELYMAVCDELRHLQSHLSDEFQKGRVVSDLYELVQYAGNIIPRLYLLVTVGVVYIK
NKPEAREAILKDLVEMCRGVQHPLRGLFLRNYLLQCTKNVLPDHAIDESEKQEGPPALQH
SIDFILLNFAEMNKLWVRMQHLGHSREREKRERERQELRILVGTNLVRLSQLEGVDVNSY
RKIVLNGVLEQVVNCKDAIAQEYLMECIIQVFPDEFHLQTLRSFLKACADMHPRVNVKNT
IIALIDRLAQFAAREEDSGIPSEIMLFDIFSEQIANIIDTRSGMLLEDVVSLQTALVKLA
FKCYPNRVDYVDRVLEATMDLFGKRNMDSVPNGSALSSELYNLLEVPIKSYNNILTVLQL
QCFAPLYEHLDYESRKRIGVQMLVNALEHHTLLPSAEQVNSLLMLVSPLIQDQADQPTDI
DMDDFSEEQGLIGQFIHQLYSEEPDQQYQILNKARTHFEKGGNKRMIFTLPAIVFSAYKL
AVRYKELSDEDERWEKKCNRIFEMCRAVINTLCQAEIAELPLRLFIQGALCASELQFENH
ESVAYEFISQAFSLYEEDITDSRAQLAAVMLLISAVERCRCFSEDSHAPLRTQCAHAASR
LLKKPDQSRAVAHVAHLFWSGQITEGDGEPMHDMRRVLECLKKAIRIASQCMESAVQLQL
YVEILNKYMYFYEHGCTGVTMELLNQLIKKIREELQDIEGNEESSMIKVHFENALEHIRN
HQQSGDGQYSYEGITL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaaacgtggagaacacagaggaacaagagagacttctggatgaagctctc
caagtggtgaagatggagagttttcacatgaaacgggagttagataaaaataaactaatg
gatgggcttaagcatgcatcagatttattgaaagaattacgtacatccgctcttacccca
aagaattattatgaactctatatggctgtgtgtgatgagcttcgtcatctacaatcacat
ttgagcgatgaatttcagaaaggaagagtggtctctgatttatatgagttggttcaatat
gctggaaacataattcctagattatatcttttggtcactgttggtgttgtttacataaaa
aataaaccagaagctcgagaagcaatattgaaagacttggtagaaatgtgtcgaggagtt
caacacccattgcggggactttttctgagaaattatcttctgcagtgcaccaaaaatgtg
ctaccagatcatgctatagatgagagcgaaaagcaagaagggccgccagcattacagcat
tccattgatttcatcttattaaactttgcagaaatgaacaagttgtgggttagaatgcag
cacttgggccatagtcgtgaaagagaaaaaagggaacgcgaacggcaagaactgagaatt
cttgtcggaaccaatttggtcagacttagtcaactggagggcgttgatgtaaatagttac
agaaagattgttctcaatggtgtactggagcaagtggtaaattgcaaagatgccattgcc
caggaatatttaatggagtgcatcattcaggtgttccctgacgaatttcatctccaaaca
ttacgaagctttctgaaagcatgcgctgacatgcaccccagggtgaatgtcaaaaacact
attatcgctttaattgacagattagcccagtttgccgctcgagaggaagattctggaatt
ccaagtgaaattatgctctttgatatattttcagaacaaatcgcaaatatcattgataca
aggtcaggaatgttgttagaagatgtggtctccttgcaaactgcacttgttaaattggct
ttcaagtgttatcctaatcgggttgattatgtggacagggttttagaagctaccatggac
ttgtttggaaagagaaatatggactcggttccaaacggtagtgctttgtccagtgagctt
tataacctgttggaagttccaatcaaatcatacaacaacatcttaactgtactacagcta
caatgttttgctcctttatatgaacatttggattacgaatcaaggaagaggattggtgtg
cagatgttagtaaatgcattggaacatcatacattacttccttccgctgaacaagtgaac
tctctgcttatgcttgtatctcctcttatacaagaccaagctgatcaacctactgacatt
gacatggatgatttctcagaagagcaaggcttaataggccaatttattcatcagctttat
tcagaagagcctgatcaacaatatcagattttgaacaaagcgagaacccattttgaaaaa
ggaggaaacaagcggatgatttttactcttcctgctattgtattttcagcatacaagttg
gctgttcgatacaaggaacttagtgatgaagatgaaaggtgggagaaaaaatgcaaccga
atatttgagatgtgccgtgcagtgatcaatacattgtgccaagcggaaattgctgaacta
cccctgagactttttattcaaggagcactttgtgcctctgaactgcagttcgaaaatcac
gaatctgtagcatacgagtttatctcccaggcgttttccctatatgaagaagatatcaca
gatagccgagcacagttggctgcggtcatgttgcttattagtgcggtggaaagatgccgt
tgctttagtgaagatagtcatgcgccgctacgaacacagtgtgctcatgctgcctctcgt
ttgttgaagaagcccgatcagtcacgagctgttgcccacgttgctcatctcttctggtct
ggtcaaataacggagggggatggagagccgatgcatgatatgcgtcgagttttagaatgt
cttaaaaaggcaatacgcattgcaagtcagtgtatggagtcagcagttcagctccagctc
tatgtcgaaattctgaacaagtacatgtatttctacgaacacggttgcaccggtgtaact
atggaactgctcaatcaattaatcaaaaaaatccgcgaggaacttcaggatatcgaaggc
aacgaagaaagttcaatgataaaagttcacttcgaaaacgctttagagcacattcgaaac
caccaacagtctggtgacggtcaatacagctacgagggtattacgttatag
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