KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143452709
Entry
143452709         CDS       T11416                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04120  Ubiquitin mediated proteolysis
clep04137  Mitophagy - animal
clep04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    143452709
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    143452709
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    143452709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clep04121]
    143452709
Enzymes [BR:clep01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     143452709
Ubiquitin system [BR:clep04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    143452709
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING
Other DBs
NCBI-GeneID: 143452709
NCBI-ProteinID: XP_076809875
LinkDB
Position
4:complement(7199351..7205452)
AA seq 292 aa
MSRQKSIPEFAPNPASDRASDHRPMEVASANSGALATSGSDLASLFECPVCFDYVLPPIL
QCQSGHLVCSSCRPKLTCCPACRGTLGNIRNLGMEKVAMTVDFPCKYASSGCEVTLRYTH
KTEHEETCEFRPYSCPCPGASCKWQGTLDAVMPHLMTAHKSITNLQGEDIVFLATDINLP
GAVDWVMMQSCYGHHFMLVLEKQEKLDGHQQFFAIVQLIGTRKQAENFAYRLELNGPKRR
LTWEATPRSIHEGVSSAIMNSDCMVFDSAIAHMFADKGNLGINVTVSMCNCS
NT seq 879 nt   +upstreamnt  +downstreamnt
atgagtcgacagaaaagtattcctgagtttgccccaaatcctgcgtcagatagggcatct
gatcacagacctatggaagtggcgagtgcaaatagcggcgcactcgccacatctgggagt
gaccttgctagtttgttcgagtgtccagtatgttttgattatgtccttccacctatactt
cagtgtcagagtggccatcttgtttgcagcagctgtcgtcctaagttaacttgctgccct
gcatgccgtggaactcttggaaatattcgtaatctaggcatggaaaaggttgcaatgact
gttgattttccatgcaagtatgcttcatctggttgcgaagtcactctgcgttatactcat
aagacggagcatgaagaaacgtgtgaatttcgtccatactcctgtccctgcccgggagca
tcttgcaagtggcagggcactttggacgctgtcatgccacatttaatgaccgcccataaa
tcaattacaaatttacagggtgaggatattgttttccttgcaaccgatataaacttgccc
ggggcagtggattgggttatgatgcagtcatgctatggccatcattttatgcttgttctc
gagaagcaagaaaaacttgatggacatcaacaattttttgctattgtccaattaatagga
acaaggaaacaagcggaaaactttgcatacagacttgaacttaatggacctaaacgccgt
ttaacttgggaagcaacaccacgttctatacatgaaggcgtatcatcggcgatcatgaac
agcgactgtatggttttcgattctgccatcgctcatatgtttgcagataaaggaaacctc
ggtatcaatgttactgtgtccatgtgcaactgttcatga

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