Clavelina lepadiformis (light-bulb sea squirt): 143452842
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Entry
143452842 CDS
T11416
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04512
ECM-receptor interaction
clep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
143452842
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
143452842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clep04515
]
143452842
Cell adhesion molecules [BR:
clep04515
]
Integrins
Integrin alpha subunits
143452842
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GFIT
Other DBs
NCBI-GeneID:
143452842
NCBI-ProteinID:
XP_076810088
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Position
4:20402501..20414330
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AA seq
1038 aa
AA seq
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MTIHKSIKWLSSKSWTVYFFFLLCITKRVLGFNLDVEFATFFKAPQLGSRFGYDVDLYGG
SSKSWIVVGAPNANTNGDVYRCIYNPAVNVTSCDLVPISKVSSTNEVKQRLGSTVSIGKN
RNLLTCAPNYAHTSKGVRATFYDLIGVCYLVQDFAKPKTSTYRYTPCLDQYGSHYGDSHS
FCQAGFSASFTKDRQKILLGAVGSYYNQGSLILIDRIYQNISSLTVTTYTDEFKVTKPPD
FPGELADYYRQTYDVNYMGYSVAIGATGSNLPLIVTSAPRRFGYNLLGAVTIYDDKLKTA
LVNLTGEQIGEYFGEGLAVVDVNGDNLDDVIVGSPLYTDFSRKEPEIGRIYIYYQQAGVN
QSNTDRHILFSDPTIINGNVSMGRFGQAITSLTDINNDGYQDILVSAPYETSNTNDADEN
QYGALYVFNGGAEGIHENPSQVIHGNDLEKTINFDPTQHIRGLGYSMKGGKDMDGNGYPD
IVVGAYLSDQAIVIRSRPVVKLVATSEILPRKVDLETLSCTLPDKTKAACYEVKTCFSYT
GKNLPSSVRISYSYDVDSGMREEDKRSYLLDLEYRNITLVAGNEKCVTETVYVKRTLRDK
LSPIEVEVSYWLRETHQPVEPVLDTLLGTSVTTTAEIFKDCGADEVCIPDLKVASEVSPT
TAYVGDYTEIVMTATASNDAENAYQALLLVRYPLTFASFVGLDGDQGALPSCRDINQTVI
CDIGNPLKTNAHVTVKLRFGINDLLGDVPTLSFQTLANCTNENSFVSNTVTSQIDIKVYA
KMQIYNVSEPSTISLNKVSNKTNSKLVSHSYEITNLGPSTIAEARISLLWPIFYNGKYLF
PLYDVISQGDIECDYTAIINASQASEEGILVPEDKSPAIEGGQLENFFNCRTVSDSCFEM
KCKVGRMEPKTDVLITMKGNLYLNSFLESDLDSVVTSSLVFDILKYPYVVTDDSPNLLSE
VSTYAVYPRVETQSLPWWIVAVAVAAGVLFLLIIILVMWKCGFFKRKRTTQTEEDRIQQE
KLCEEPDPMQKEVEERMK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcacaagtcaataaagtggttatcgagtaaaagctggacagtctatttcttt
tttctgttatgtattacaaaacgtgttcttggatttaacttagatgtcgaatttgcaacc
ttttttaaagcaccacagctgggctcaagatttggatatgatgtcgatctttatggaggt
tcatcaaagtcctggattgtggtcggtgcaccaaatgcgaatacaaatggtgatgtgtat
agatgcatctacaaccctgccgtgaatgtcacttcttgtgacttagttccaatttccaaa
gtgtcttcaacaaatgaagtaaaacaaagactaggatccacagtgtcaattggaaagaac
aggaacttactgacatgcgcaccaaactacgcccacacaagcaagggtgtgcgggctaca
ttttatgacctgatcggagtctgttacctcgtgcaagacttcgccaaacctaaaacatca
acatatcgttacacaccctgtctagatcaatatggctcccattatggtgattctcacagt
ttttgtcaggcgggctttagcgcatcatttacaaaggatcgacagaaaatattacttgga
gctgttggttcctattacaaccaaggatctttgatactgattgatcgaatttatcaaaac
atatcaagtttaactgtgaccacatacactgacgagtttaaggttactaaaccaccagat
tttcctggagaacttgctgattattacaggcaaacatatgatgtgaattacatgggttac
tcagtggcaattggtgctacaggaagcaatcttcctttgattgtcacaagtgcacctcgt
aggtttggttacaacctgcttggagctgttactatttatgatgacaagttaaagacggct
ttggttaacttaaccggtgaacagattggcgaatatttcggagaagggctggctgtagtt
gatgttaatggagacaatcttgatgatgtcatagttgggtctcccttgtatactgatttt
tccagaaaagaaccagaaatcggcaggatttacatttactatcaacaagctggtgtcaat
caatcaaatacagacagacacattttgttctccgatcccacaattatcaatggcaatgtt
tctatgggtagattcggccaggccatcacttcactcacagatattaataatgacggatac
caagatattcttgtgtctgcaccatacgaaaccagcaacaccaatgacgcagatgaaaac
cagtatggagctctgtatgtattcaatgggggggcagaaggtatccacgaaaacccatct
caagtaattcatgggaatgacttggaaaagacaattaactttgaccctacccagcatatc
aggggcttgggatattctatgaaagggggcaaagatatggatggcaatggttatcccgat
atagtagttggagcatatttatcagaccaagcaattgtcataaggagccgccctgtagtt
aagttggttgctacaagtgaaatcttgccgcgcaaagtggatctagaaactctttcatgc
actttgccagacaaaacaaaagcagcttgttatgaagtcaagacttgtttctcgtacacg
gggaaaaaccttccttcttctgtccgtatatcgtattcatacgatgttgactctgggatg
agagaagaagataaacgatcctatttgcttgatctcgaatatcgcaacatcactttggtg
gccggcaatgaaaagtgtgtgacagagaccgtatatgtaaagcggacactacgtgataaa
ctgtccccgatagaagtggaggtgagttactggctgcgcgagacacatcagcctgtggag
ccagttctggacactctattggggacaagtgtgactacgacggcggagatcttcaaagat
tgtggtgctgatgaagtgtgcatacctgacttgaaagtagcatcagaagtgagccccaca
acggcgtatgtgggtgactacactgaaattgttatgaccgccacagcttctaacgatgct
gaaaacgcataccaagctcttttgctggtacgctaccctcttacatttgcttcatttgtt
ggcttggatggagaccagggtgccctgccaagctgtcgtgacataaatcaaactgtgatt
tgtgatattggtaatccattaaaaacaaatgcccatgttactgttaagcttagatttggt
atcaacgaccttttaggagacgtacctaccttgtcatttcaaacattggctaattgcacg
aatgaaaacagtttcgtatccaacactgtcaccagccagatagacatcaaggtgtatgct
aaaatgcagatttacaacgtttcagagcctagcaccatttctcttaacaaagtttcgaat
aaaacaaattcaaaactagtttctcactcttacgagataaccaacctgggtccatcgacc
atagcagaagctcgtatttccctcttatggccaatattttacaatggaaaatatctcttt
cctctctatgacgtcatttcgcagggagacattgaatgtgattatacggccatcatcaat
gcgagccaagcatccgaagaaggtattcttgtgcctgaagacaaatctccagccattgaa
ggaggacaactggagaatttctttaattgccgaaccgtttccgattcctgctttgaaatg
aaatgtaaagttggaagaatggaaccgaaaaccgatgtcttaattaccatgaagggaaat
ctctatctcaattccttcctagaaagtgatttggattcagttgtcacctccagtttggtt
tttgacatcttgaagtacccttatgttgttactgatgatagccctaatcttttatcagag
gtgagcacatatgcagtctatcctcgggttgaaacccaatctttaccatggtggattgtg
gcagtcgccgtcgcagctggagttctcttcctcttaatcattatcctggtaatgtggaag
tgcggatttttcaaacgaaaacgcacgacacagacagaggaagatagaatacagcaagaa
aaactctgtgaggaaccagatcctatgcaaaaagaagttgaagaacgaatgaaataa
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