Clavelina lepadiformis (light-bulb sea squirt): 143452900
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Entry
143452900 CDS
T11416
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clep03009
]
143452900
Ribosome biogenesis [BR:
clep03009
]
Eukaryotic type
90S particles
Other 90S particles
143452900
Pre-60S particles
Other pre-60S particles
143452900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_RFWD3
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_SCAP
ANAPC4_WD40
TAF1C_beta-prop
Beta-prop_Vps41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
143452900
NCBI-ProteinID:
XP_076810158
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All DBs
Position
1:complement(9429708..9442627)
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AA seq
603 aa
AA seq
DB search
MDLDEEEVKGGSSQIFCLTWIKRKAAKPVPDQIALTDTELKNLIKHKKVSDDDCSEDEDS
TDKLEGSSDHNNFVNNDDNGDDGDNDDDDLKEFDLDNYDNETSEMFGETMSDLVVFASNE
EDPYIKQDKEDDSDEEEKEDLTLNDQDNMLVCARCEKDYASLEVHLYNHESKDFYVHHDV
SLSSAPLCMQWLDFDAGNVLDRCSSNKGNFVAIGNIDSVIDVWDIDVLNTLEPAYSLGVP
KEKQDEYLARGKTKFGHTDAVLDLSWIPLARNKIATASVDHRVALWDLEKAKVEKFFKNH
KEKVQTIEWKPDSVHCLLSGAFDGRIFALDTRSGASSSGNFKWKLKGEIEKVKWNLGDTN
YFSASTDKGIIYYCDLRKPMKPLYNFQAHDEAIPALSMTSSLLVSGSSDGIVKVWKLGST
SAELLEEKNMKMGMVHCFHLNPDVMSLLAVGGERDGVKLWDVKTSMKKSHEEFSDINCNV
KSWPKESESSSVKIETEIENKNKGKSPENDNEQENEIESKCAKTTKKRHKKSTMSKDAKD
QSTFEESSVHTASNGRRKKRHKRNDSSSLLSPDHDSSGIRRKRMFPKQRRKLMRKLLQAE
NTG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatgaagaagaagttaaaggcggaagtagccaaatattttgcttgacatgg
atcaaacgaaaagccgcaaaacctgttcctgatcagattgcccttactgatactgagtta
aagaatttgataaagcataaaaaagtttctgatgatgactgcagtgaagatgaagacagc
actgacaaattagagggatctagtgaccacaacaactttgtaaacaatgatgataacggc
gatgatggtgataatgatgatgatgacttgaaagagtttgacctggacaactatgataat
gagaccagtgaaatgtttggcgaaacaatgtccgatctggtggtatttgcttcgaatgag
gaagacccttatattaaacaagataaggaagacgattccgatgaagaagaaaaggaagac
ctcaccctaaatgatcaggataacatgttggtttgtgcccgatgtgagaaagattatgct
tcattagaagttcatttgtacaatcatgaaagtaaagacttctacgtacaccatgacgtg
tctttgtctagcgctcctctttgcatgcagtggcttgacttcgatgccggcaatgttttg
gacagatgtagcagtaacaagggtaacttcgttgcaattggaaatattgattccgttatt
gatgtatgggacatagatgttttgaacacattggaacctgcatattcgcttggtgttccc
aaggaaaagcaagatgaatacttagctcgtggtaaaaccaagtttggacataccgatgca
gttttggatttatcgtggataccattggcaaggaacaaaattgcaactgcctctgtggat
caccgtgtggcgctgtgggaccttgaaaaggcaaaagtggaaaagttttttaagaatcac
aaggagaaagtccaaactatcgaatggaaaccggattcggttcactgtttgctgtctggt
gcattcgacggacgaatttttgcgcttgacactcgttctggtgcgtcatctagcggtaat
tttaaatggaaattaaaaggagaaatagaaaaggtcaaatggaatctcggggatacaaat
tatttttcagcaagtactgataaaggaatcatctattactgtgatctgagaaaaccaatg
aaaccgctgtacaatttccaagctcacgacgaagccattccagccttaagtatgacgtca
tctttgttagttagcggatcaagcgacggcatcgtaaaagtttggaaactaggctcaaca
tccgctgagttgcttgaagagaagaatatgaaaatgggcatggttcactgctttcaccta
aatcctgacgtcatgtcgttgctagcagtaggcggagaaagagatggagttaaactatgg
gatgtcaagacgtcaatgaaaaaaagtcacgaagagttttccgatatcaattgtaacgtg
aagagctggccgaaggaaagcgagagctcgtctgtcaagattgagacagaaatagaaaac
aagaacaaaggaaagtctcctgaaaacgacaatgaacaagaaaatgaaatcgaaagtaaa
tgtgctaaaactaccaagaaaaggcacaaaaaatccacaatgtcgaaggatgctaaagat
cagtctacgtttgaggagtcatcagtccacacggcatcaaatggtagacgcaaaaagaga
cataagaggaacgacagctcgtcattattgtcaccggaccacgacagcagtggtattaga
cgaaagcgtatgtttcccaaacaacgcagaaaattaatgagaaaattattgcaggctgaa
aatacggggtga
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