Clavelina lepadiformis (light-bulb sea squirt): 143453044
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Entry
143453044 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143453044
KO
K04819
5-hydroxytryptamine receptor 3
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
143453044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clep04040
]
143453044
Ion channels [BR:
clep04040
]
Ligand-gated channels
Serotonin (5-HT3)
143453044
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
143453044
NCBI-ProteinID:
XP_076810310
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All DBs
Position
4
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AA seq
666 aa
AA seq
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MTIFFMLQERILWTAIIYCCLHTTHGKGKTAAKVGLSGLTQVSNLGATSSSSASTDEIKR
ERSHHNTTTVNAMSRLKRDLFVVQSYDKSMRPVKNHTDAVLLYIDITYMQVLDMNEKDQV
VRSMIRYRVVWVDQYFQWDPKDYEGITDFWLPSSSMWIPDLLAYEETGGRDYSPRIPYVI
VNYKGMISYFEPVAFETTCGVNIAYFPFDSQTCTFTFLSWTIPTSKLDIMSRRTADEMSK
DIKLYSSRNGEWILESIGVEKESERSNHDQNDTKENFNGHIGNGEKKDKKKKEAISRFYH
MNPQEKVKDVAPSRNTDLHWSQIRFTIKLRRNSALYIQSMLFPALLLTTISLLGFYLPPD
SGERIGLQITILLTFMVFLLTVGDMFPASTGPYLGLYFVLCMAQLGLNIIMTVLVLYLHH
MPVAMITEKNDMTGEHEIRKSAIPIWIKFALIIAGIYDALDSNACKSTELHQKRPLERPA
TNWLRWLREKLSTLSFVGSKAKTTDTHHMKSNQIFSFHGAVSDITTNKKKIIPTVYTQSG
MNIKATTSGKNTLSAYVEQHGNGVSIKPDRHKNFTAQSKSNQQNITHLSVVSEILFELRS
VSCAMSKTIDHISTHANQSQRDREDEEMQEHWKEIARKVDHSSLCLYAFCLLVFHVGILV
AAYFGV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacaatatttttcatgttgcaagaaaggattttgtggactgcaattatttattgttgt
ctccacacaacgcacggaaaaggcaaaacagcagcaaaagttgggttaagtggattgact
caggtttccaatttaggcgcaacttcttcatcgtcagcatctacagatgagatcaaaaga
gagcgctctcaccataacacgacgacagtaaacgccatgtcaagattaaaacgggattta
tttgttgtacaaagttatgacaaatcaatgagaccagtcaaaaatcacacggatgcggtt
cttctttacatagacatcacatatatgcaggtactagatatgaacgagaaagaccaagta
gtaaggagcatgatccgctatcgtgtggtctgggtagaccaatattttcaatgggatcca
aaagactatgaaggaattaccgatttttggcttccatcttcttcaatgtggattccggat
cttctcgcctatgaagaaaccggaggtcgagattattctcctcgtattccttatgtcatt
gttaattacaaaggcatgatcagttattttgaaccagtagcatttgagacaacatgcgga
gtcaatattgcctattttccttttgactcgcaaacatgtacgtttacattcttgagttgg
acgattcccacaagcaaattagatataatgtcacgccgcacggcggatgaaatgagcaaa
gatattaaactctactcatcgcgaaacggggaatggattctagaatcaattggtgttgaa
aaagagagtgaacgaagcaatcacgaccaaaacgatacgaaggaaaattttaatgggcat
atcggaaacggagagaaaaaagacaaaaaaaaaaaagaagccattagtcgtttttatcat
atgaacccacaagaaaaagttaaagacgttgccccatcaagaaacacagatcttcattgg
tcacaaataaggtttaccatcaaactacgaagaaattctgcactttatattcagagcatg
cttttccctgcgttactcttgaccacaatatctttacttgggttttatcttccgcccgac
agcggagaacgcattggcttgcaaattacaattttactcacctttatggtatttttattg
acggttggtgacatgtttcccgcttctaccggtccctacctcgggctttattttgttcta
tgcatggcgcagttaggacttaacattatcatgactgttttggtgttatacttgcatcac
atgccagtggcaatgatcacagaaaaaaatgacatgacgggtgaacatgagatacggaaa
agcgcaattccaatttggataaaatttgcattaataattgctggtatttacgatgcactt
gactctaacgcatgtaaaagcacagagctacatcaaaaacgcccactcgagcgtccagca
acaaactggcttcgttggctacgagaaaaactttctactctttctttcgtcggttcaaaa
gcgaaaactacagacacccatcatatgaagtctaatcagattttctcctttcacggcgcc
gtttctgatataacaactaacaaaaagaaaatcattcctacggtatatacccaaagtgga
atgaatattaaagctacaacctcaggcaaaaatacactttccgcatatgttgaacaacat
ggtaacggtgtaagcataaagccagaccgtcacaagaatttcacagcacaaagcaaatca
aaccagcaaaatattacccatttatccgtggttagcgaaatattgttcgaattacggagc
gtttcctgcgcaatgtccaagacgattgaccacatctctactcacgccaaccagtctcaa
agggacagggaagacgaagaaatgcaagaacactggaaagaaatagctagaaaggttgac
cattccagcttgtgtttatatgcattttgcttgttggttttccatgtaggaatattggtt
gctgcttacttcggtgtttaa
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