KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143453488
Entry
143453488         CDS       T11416                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-like isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    143453488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clep04121]
    143453488
   03036 Chromosome and associated proteins [BR:clep03036]
    143453488
Enzymes [BR:clep01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     143453488
Ubiquitin system [BR:clep04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    143453488
Chromosome and associated proteins [BR:clep03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     143453488
    Noncanonical PRC1 (PRC1.1)
     143453488
    Noncanonical PRC1 (PRC1.3/1.5)
     143453488
    Noncanonical PRC1 (PRC1.6)
     143453488
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 RAWUL zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 RING_XB3-XBAT31 zf-RING_6 zf-Nse zf-C3HC4_4 zf-RING_4 zf-rbx1 zf-UDP TRAF3_RING zf-C3HC4_5 Sina_RING zf-ANAPC11
Other DBs
NCBI-GeneID: 143453488
NCBI-ProteinID: XP_076810952
LinkDB
Position
4
AA seq 353 aa
MSQSNNNNFVQTTKTWELTPYELQRKPQEVITDNTEIAISPRSLHSELMCPICLDMLRVT
MTTKECLHRFCSECIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALIAKIYPSRDEYE
AHQEKVLQSITKHHNSAALTASIEEGLKVQASARSQKVRKQEQSSPANSSDIKSETNSIS
NPKTEDGKENQLQPSTSEQTSEKKQEDCTTSPSLKKRKLSESIEGTSKQATEASTNNESH
KEKQTVSIELELRPHPEQTGLKVEQLVRYIKTAAHATVLHLSRYIAMRIAIEKQPGKAAS
IANTTETLSEFSLFVKLDEKSFQDLDNSESLDMVHESSCNNGSRLQVYYLKKS
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtctcaatcgaacaacaacaactttgtccaaaccacgaaaacatgggagctgacacca
tatgaattgcaacgtaagccccaggaggttataacagacaatacggaaatagcaatctca
ccacgtagcttacacagtgaattgatgtgcccgatatgtctggatatgctgagagtcaca
atgactacaaaagagtgtcttcacagattttgctccgagtgtatcatcacagctctcagg
agtggtaacaaagaatgcccaacatgtcgaaagaagctcgtgtcaaagcgatcgcttcgt
cccgatcccaacttcgatgcattgatcgcaaagatttacccatccagggacgagtatgaa
gctcaccaagaaaaagttcttcaaagtataacaaagcaccacaactcagcagcacttaca
gcaagcattgaagaagggcttaaagtgcaggcgtctgcgagaagccagaaagtgagaaag
caagaacaatcttcgcctgctaattcatctgatatcaaaagcgagaccaactcaatttcc
aatcctaaaaccgaggatggaaaagaaaaccaactccagccttcaacatcagaacagact
tctgagaagaaacaagaagactgcacaacatctccttctttaaagaaaagaaaattatct
gaatcaattgaaggcacttctaaacaagctacagaggcatccacgaacaatgagtcccat
aaagaaaagcaaactgtgtcaattgagcttgagttacgacctcatcctgagcaaaccggc
ttaaaagttgagcaacttgtcaggtacattaaaacagcagcacatgcgacagtgttgcat
ttatcgcgttatattgcaatgaggattgcaatagaaaagcaaccaggaaaggcagccagc
atagcgaataccactgaaactctttcagaattttctctgtttgtgaaattggatgaaaaa
tctttccaagatttggataacagtgagagcttggacatggtacatgagagttcttgcaac
aatggctcgagattacaagtttattacctaaagaagtcatga

DBGET integrated database retrieval system