Clavelina lepadiformis (light-bulb sea squirt): 143453556
Help
Entry
143453556 CDS
T11416
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03013
Nucleocytoplasmic transport
clep03015
mRNA surveillance pathway
clep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143453556
09122 Translation
03013 Nucleocytoplasmic transport
143453556
03015 mRNA surveillance pathway
143453556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143453556
03041 Spliceosome [BR:
clep03041
]
143453556
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
143453556
Spliceosome [BR:
clep03041
]
Common components
Common spliceosomal components
Cap binding complex
143453556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
LRR_RPS2
Barstar
Motif
Other DBs
NCBI-GeneID:
143453556
NCBI-ProteinID:
XP_076811055
LinkDB
All DBs
Position
4
Genome browser
AA seq
802 aa
AA seq
DB search
MSNRRRAHQHDSDLSDDEAKASFGKRRKTSESNEEIEKRLESLICRVGEKSSSSLESNLE
GLAAVLEADLPNFKPQILHILVLCSYQLPEKCSIYSTLLGLLNVRNYNCGAEFIEMVYCE
MKRLIVTNQFNMARYILQFIGDLVNSSVVTPSSMMGLLGAFADVTKQEGVPQSRKDWFVY
ALMAALPWCGSILSEKKGNEMETLFSKLHKYVSNRNKDHHKFLRVWSSDDPHPQEDYVEC
LYAQICKLREDGWIEDIILRPYHAFQPVLADALQHNLPQFIPPPHIAGSTVYPLPKVIFR
MFDYTDCPEGPLIPGNHAIERWLIEEHLSCLTRTYKYDKKECANRLLAIPGRDKMPLNHM
IIETLLGDMFRLPSSPNPQVFYMAVFIELCKIQPSMMPQVLALASDMLYERLDMMQITCL
DRFVNWFAQHLSNFQFRWSWDEWSDCLTMDPAMPKPKFIREVLEKCVRLAYHQRVCEIMP
PEFQALLPSNPKIEFKYAIEAGSGSSEELNADKTTAQKIISAIKNKGKDDELIVMLDVIK
PHSDGSEFNVKRLEIFLQSLLFLAQKSFSHSFSALAKFHKVIKWAADGEEGKIESLRILQ
DVWRNHPQKIGVLVDKMLRMQIVDCSSVAKWIFSPEMASDFTRLYTWEIMHATIRKMNKH
LAKLEGEMAEMRERAAVAEKKDDCDENDDMMKGFNLFAPNEDDLRMMQEKVDAASSDQKK
LFLIIFQRFIMILSDHLVRSKSLGCDYKTPWFRNTIQRLGEIFLLHKDTVVKFMMTLENL
LFTSDLDPHILTIFQQFSSISR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgtcggcgtgctcatcaacatgacagtgatttatctgatgatgaagcaaaa
gccagttttggtaaaagaagaaaaacttcagaatcaaacgaagagatcgagaaaagattg
gaatcgctgatttgtcgggtcggggagaaaagttcttcatcactggagagtaatctggaa
ggattggccgcggtgcttgaggctgatcttcccaacttcaagccacagattctgcatatc
cttgtgctatgttcttaccagctgccagagaaatgctctatttactcgactcttcttgga
cttttaaacgttcgaaactacaactgtggtgccgagttcattgaaatggtttattgtgaa
atgaaacgtttgattgtcaccaaccaattcaacatggcgcgttacatcttgcaatttatt
ggcgaccttgtgaatagcagtgtcgtgaccccttcctctatgatgggtctgctcggggca
tttgctgatgtcacaaagcaagaaggagtcccacagagtagaaaggattggttcgtttat
gccctgatggcagccctcccatggtgcggttccattcttagcgaaaagaagggaaatgag
atggagactcttttctcgaaacttcacaagtatgtttcgaatcgcaacaaagatcaccac
aagtttctgagagtctggtcttctgatgatccccatcctcaggaggactatgtggagtgt
ctttatgcacaaatctgcaaactccgagaagatggctggatagaagacatcatattacga
ccttatcatgcttttcaaccggtcttggctgatgctcttcagcacaacctgccccaattc
atccctccaccccacatcgcaggatccaccgtctatcctcttcccaaggtcattttcagg
atgttcgactacaccgactgcccagaaggtccactcatacctggcaatcacgcaatcgag
cggtggctcatcgaggaacatctcagctgtctcacaaggacctacaaatatgacaagaag
gaatgcgcaaatcgactgctcgccatacctggccgtgacaagatgccactcaaccacatg
atcatcgagactctgctcggcgacatgttccggctcccctcctcccccaacccgcaggtg
ttttacatggctgtgttcatcgagttgtgcaagatccagcccagcatgatgccccaggtg
ctcgctctcgcctccgatatgctgtacgagagactggacatgatgcagataacctgcctt
gatcgcttcgtcaactggtttgctcagcatctcagcaacttccagttcaggtggagttgg
gacgagtggtcggactgtttaaccatggaccccgccatgccaaaacccaagttcattcgt
gaagttcttgaaaaatgtgtcaggctcgcttaccaccagagggtttgtgaaataatgcca
cccgagtttcaagctttgctgccgtccaatccaaagatagaattcaaatatgcaattgaa
gctgggtcaggctccagtgaagagctcaatgcagataaaacaactgctcagaaaatcatc
tcagctatcaagaacaaggggaaagatgatgaattgatcgtcatgctcgatgtcatcaag
ccacactcagatggaagtgaattcaatgttaaaaggctcgaaatatttctgcagtcgttg
ctcttcctggctcaaaagtccttcagccattcgttcagtgctctcgcaaaatttcacaaa
gtgataaagtgggctgctgatggtgaggaagggaaaattgagtctttgaggattctgcaa
gatgtgtggaggaaccatccccagaagattggtgttctcgtcgacaagatgctgaggatg
cagatagtggattgttcatccgtggcgaagtggatcttctcaccggagatggcgtcggac
tttacacgattgtacacgtgggagatcatgcacgcaaccatccggaagatgaacaaacat
ctcgcaaagttggagggggagatggccgagatgcgggagcgagctgcagtagctgagaag
aaggatgattgtgatgaaaacgacgacatgatgaaaggatttaatctctttgctccaaat
gaagatgaccttcgcatgatgcaggagaaagtggatgcagcaagcagtgatcagaagaag
ctgtttctcatcattttccagcgcttcatcatgattctctcagatcatttggtgagatct
aaatctctgggatgtgactacaagactccgtggttcagaaacacgattcagcgactcgga
gagatcttcctgctgcacaaggacacagtcgtgaagttcatgatgaccctggagaacctc
ctcttcacatccgaccttgatccacatattttgacaatattccaacaattttcgagcatc
tctcgttga
DBGET
integrated database retrieval system
