Clavelina lepadiformis (light-bulb sea squirt): 143453558
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Entry
143453558 CDS
T11416
Name
(RefSeq) oligoribonuclease, mitochondrial-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
143453558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143453558
03009 Ribosome biogenesis [BR:
clep03009
]
143453558
Messenger RNA biogenesis [BR:
clep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
143453558
Ribosome biogenesis [BR:
clep03009
]
Eukaryotic type
Pre-60S particles
RNases
143453558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143453558
NCBI-ProteinID:
XP_076811058
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Position
4:120651..121579
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AA seq
206 aa
AA seq
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MIKFRSVYDVVKRLIHSTLPIMTQLSEAKDRLVWVDLEMTGLDIENDVILEMACLVTDGS
LNVLAKGPNLVIHQPGKVLDRMNDWCKEHHGKSGLTDAVRQSQISLQTAEYQMLSFIRAH
VPAKCCPLAGNSVHVDKKFLDKYMPQFTDHLHYRIIDVSTIKELCRRWYPDLEVPLKATN
HRAVDDITESIEELKFYQNSVFKNQL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatttagatctgtttatgatgtcgtgaaacgcctcattcattccactttaccg
attatgacgcaactgagcgaagcgaaagacagactggtgtgggttgaccttgagatgact
ggacttgacattgaaaatgacgtcattctcgagatggcatgcttagttactgacggcagc
ctcaatgttctggccaagggtccgaacctggtcatacatcagccggggaaggtgctggat
cgcatgaatgactggtgcaaagagcatcacgggaagtcaggtctgaccgatgcagttcgc
cagagccagatttccctgcagacggccgagtaccagatgctctccttcatcagagcgcac
gtccccgccaaatgctgtcccctggccgggaattccgtccacgttgacaagaagttcctc
gacaaatacatgcctcagttcaccgaccacctccattatcgcatcatagacgtgagcacc
atcaaagaactctgcaggcgctggtatcctgacttggaagttccgctgaaagcgaccaat
cacagagctgtggatgacatcacagagagcatcgaagaactcaaattttatcagaactcg
gttttcaaaaaccaattatga
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