Clavelina lepadiformis (light-bulb sea squirt): 143455962
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Entry
143455962 CDS
T11416
Name
(RefSeq) integrator complex subunit 6-like
KO
K13143
integrator complex subunit 6
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clep03041
]
143455962
Spliceosome [BR:
clep03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
143455962
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_INTS6
VWA_2
INT_SG_DDX_CT_C
VWA
Motif
Other DBs
NCBI-GeneID:
143455962
NCBI-ProteinID:
XP_076811245
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All DBs
Position
1:complement(8152346..8156887)
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AA seq
888 aa
AA seq
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MHTVLFLIDNSASMNQRCYLGTTLLDVAKGAVESFIKQRANRTDKYLLVTYDELPNGIKS
GWKDCQNHGSILNRLKSITADGLTTVGQALKLSFDILSVNRHLSGIDTYGQGRSPFYLEP
SMIVAITDGGKLSNRSSIFEELHLPMTNPLPGSELTKEPFRWDQRLFSLVLRLPANATQE
PEQLGSVPSDTSPISLMCEVTGGRSYCVKTQKTLMQCIDSLIQKVQSGVVLHFEKDSAND
KDVRKSNFSSVLGDGFGKQSPAYGAMNDYSKQSNETPLWHSLHRMIYVRPNAKSGLPVGH
WPLPEAYCPDQNAPTLPPRTAHPTLRFKCDDVEPILLTNFPYDKYELEPSPLTQVLLEKK
NSNYCWPVYVENSGKQSNVSHPCGYLKASTNLTCVNLFAMPYNYPVIIPLIDQLIKQKFK
PSNEWRRMFDDYLKTVPPYYINPLRKSLKQIAAPNLILDTFNVGLSYSVTVYFKKLKEQT
KVAADRFLVAGDMNNGSKGVSVQARYSSLSITQLPNFQKLLASLTGDDMVGTKVELNDFP
GFCITKPDAKRRVLPRQFHNPFDIPRCRLLQQLRRMRLNFKQVVQSSFAKAVGSSVENSL
RVRLQDREEIHNQPMSQMGNYQDYVKALPAPLREANPDVPKRLHTFGNPFKLAKEKGIMI
DETEDYDGPSASPGSGKRKSSGDHGSSPSKRKKMSKGFFKYNMKKPDRFQRSPSPAPSST
VETKDSQPNTLLDAQKIVKATLPAKTDGICSSKDENKQDITNFADNTITPTTISSTSSAG
SVTKNALVKASIADKPVSIALENQNEQIKVNIIKLIRKPGRYNNEVLSYLNQLSGTPAMK
QKVMETLIAEALRFKRNQLLSLFQQYGDTLNRTSNLLASLEKCRSTNV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagttctatttctcattgacaattctgcatcaatgaaccagcggtgctattta
ggaacaacacttcttgatgttgccaagggtgcggtggaaagtttcatcaaacagcgagca
aatcgcactgacaagtaccttttagtcacttatgatgaacttcctaatggtataaagtca
ggatggaaggattgtcaaaaccacggatcaattttaaacagacttaagagcataacagct
gatggactgacaacagtaggacaagccctaaaattgtcattcgacattctaagtgtcaat
cgtcacctttctggtattgatacttatggacaagggcgcagcccattctacttggaacca
tctatgattgttgccataactgacggtggcaagttgagtaacagatcatcaattttcgaa
gaattgcatcttccaatgacaaatccccttccaggaagtgaattaacaaaagaacctttt
cgatgggatcagagattgttttcgttggttttgcgattgccggccaatgcaacacaggaa
ccagaacaactaggtagtgtccctagtgatacatctcctatcagtttaatgtgtgaggtt
acgggcgggaggtcatattgtgtgaaaactcagaagactttaatgcaatgcattgactcc
ttaatacaaaaagttcagagtggtgtggtattacattttgaaaaagacagcgcaaacgac
aaagatgtaagaaaatctaatttttccagtgtactgggtgatggttttgggaaacagtcc
ccagcgtatggggcaatgaatgattactctaaacaatccaatgaaacacctttgtggcat
tctttacataggatgatatacgtccgtcccaatgctaaaagcggtttgcctgtgggccac
tggcctttgccagaagcttactgcccagatcagaatgcacctactttacctccaagaaca
gcacatcctacattacgttttaagtgtgacgatgttgagcctatattactgacaaacttc
ccatatgacaaatatgagttagagccgtcacctttgacacaggtacttttggaaaagaaa
aattccaattactgctggccggtttatgttgagaacagtggaaagcaaagtaatgtctcc
cacccctgtggctacttaaaagctagcaccaacttaacttgtgtgaatttgtttgcaatg
ccgtacaactacccagttattataccacttattgaccagctgataaagcaaaaatttaaa
ccatcaaatgaatggaggcgtatgtttgatgattacctcaaaacagttcctccatattac
attaatcctcttcgtaagtcactaaagcaaatagctgctccaaatcttattttggacacc
tttaatgttggtctcagctattctgttactgtttatttcaagaagttaaaggaacagaca
aaggtggcagctgatcgttttctggttgctggcgatatgaacaatgggagtaagggtgta
tctgtgcaagctcgatacagttccttatctatcacacaactcccaaacttccaaaagctt
cttgcttcacttacaggtgatgatatggttggcacaaaagtagaattgaatgattttcct
ggattctgtataaccaaaccagacgcaaaacgcagagtactgccaagacagtttcacaat
ccatttgatataccaagatgtcgcttacttcagcaactgcgaaggatgagactaaatttc
aagcaagttgtgcaatcgtcttttgctaaggctgttggctcctctgtggagaattcactt
agggtgaggttgcaagacagagaggaaattcacaatcagccaatgtcccagatgggtaac
tatcaggactatgtcaaggcacttcctgccccacttcgtgaagccaacccagatgtgcca
aaacgattacatacatttggaaatccgtttaaattagcaaaagaaaaaggaataatgatt
gatgaaactgaagattatgatggaccatctgcatcccctggctcaggcaagaggaaatct
tctggagatcatggttcttcaccaagtaaaagaaagaaaatgtcgaagggattcttcaag
tataacatgaagaagccagacaggtttcaacggtctccttccccagctccatcctcaact
gtagaaaccaaagactctcagcccaatactcttcttgatgcacaaaaaatagtaaaagca
accttgccagctaaaactgatggaatttgtagttctaaagatgaaaacaagcaagatatt
acaaatttcgctgacaacaccataacacccacgacaatttcttctacttcctctgctgga
agtgttacaaaaaacgctcttgtaaaggcttctattgctgacaaaccagtgtcgatagct
ttggaaaaccaaaatgaacaaattaaagtcaacattattaaattgatccgaaaaccagga
cgatataataacgaagtcttgtcttatcttaatcaactctctggaacgccagcaatgaag
cagaaagttatggaaactcttattgctgaagcactgagatttaaacgtaatcagctttta
agtttatttcaacagtatggagataccctgaacagaacatcaaatctattggcttcgtta
gaaaaatgtcgttctacaaatgtatga
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