Clavelina lepadiformis (light-bulb sea squirt): 143458705
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Entry
143458705 CDS
T11416
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143458705
04121 Ubiquitin system [BR:
clep04121
]
143458705
Transcription factors [BR:
clep03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
143458705
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
143458705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like_helical
ZBED1_RNase-like
DUF659
zf-BED
Dimer_Tnp_hAT
DBD_Tnp_Hermes
DUF8247
Vps39_1
FAM200-ZBED5_RNase-like
YlmH_RBD
Motif
Other DBs
NCBI-GeneID:
143458705
NCBI-ProteinID:
XP_076811671
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All DBs
Position
5
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AA seq
609 aa
AA seq
DB search
MSTSRGRKKSSSVWEHFSKPDEKNRVVCRHCKGILSYCNSTGSLLKHLKTKHLFLNISGI
EGSLSASANNNSGESSKQSDTVTPHPPAAKKRSHQTLLDGHIHRAFTPTQEAKVTSLIMN
VIVGDLRPINLVEGSNFKQLIQFLAPGYDLPGRMTFTRKLDSMLLKCKKKITNILSAANH
ISFTTDLWSSLRQQSYIGVTAHCLVTKTGQLQTFVIATKQVMDSHTGINIADWIESTLEE
YSLSPGQIFAVVSDNGSNMVRACEILNERHNWTHVRCSAHSLQLCIKDACSLPAIKSALA
AARHLVQYFKQSHKAAEALRLLQRQQQQGETESGALELVLDVATRWNSTFQMIQRLCHLQ
WMVRQILSDTTVTSRSKASHLEIRDHHWFLLQGLVEELLPLKVASDFIEGDQYVTTAAIV
PLIKGLLSNYSSSSSGSSTSSASVHISAFRQKIKSAIECRFDFKPHYATRVCLHLKSKMI
SQSKSDTDTTAAIIAPPHNPIPVGHSSVSMMENLFNLGMEEATKGDADDEGADIDTMANN
EVSAYLKENSNNTDVLDICLKYLSLPASSAASERCFSSAGLTATVLRSRLTGSHLEALNI
LHCNKQLLD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactagtcgtgggcgaaaaaaaagttccagcgtgtgggaacatttttctaagcca
gatgaaaaaaatagagtggtgtgtcgccattgcaagggaattttatcatattgcaacagt
actggcagtctgttgaagcacttgaagacaaagcatctgtttttaaatatcagcggaatt
gaaggcagtctctctgcaagcgcaaataacaacagtggtgaaagttctaaacaaagtgat
accgtgacaccacatccaccagcagcaaaaaaaaggtcccatcaaactttgttagatgga
cacattcatcgtgctttcactccaacccaggaagccaaagttaccagccttattatgaac
gtaattgttggagatctacggccaattaacctcgttgaaggtagcaacttcaagcaactt
atccagtttttggcacctggatatgacttgccaggaagaatgacttttacgaggaagctg
gacagcatgttactgaagtgcaaaaagaagatcacaaacattttgtcagcagctaatcat
atatctttcaccacagatttgtggtctagtttgcgccaacaatcatacattggtgttaca
gcccactgcttggtcaccaagaccggtcagttacaaacttttgttatcgcaactaagcaa
gtcatggactctcacactggtattaatatagcagattggattgagtccacactggaggag
tattcactgagcccaggtcaaatatttgctgtggtgtcagacaatggtagcaacatggtt
cgtgcatgtgaaattttaaatgaacggcataactggacacatgttcgatgctcggcacat
agtctgcaattgtgcatcaaagatgcttgttccttacctgctataaaatctgctctagca
gctgcaaggcatctggtgcaatattttaagcagtcacacaaggcagcagaagctttgcga
ttgttacagcggcaacaacaacagggtgaaactgaaagcggtgcattggaattagtgctg
gatgtggctacaaggtggaattctacctttcagatgattcaaaggctttgccacctccag
tggatggtgcggcaaattctaagcgacactacagttacaagccgttccaaagcaagccac
ttggaaatcagagatcatcactggttcttgcttcaaggactcgtggaagaactgttacct
ctaaaagtggccagtgactttattgaaggagatcaatatgtgacaactgcagccattgta
cccttaattaaagggctgttgagtaactattcaagctcctcctcaggctcctctacaagt
agtgctagtgtgcatatttctgcatttagacaaaagataaaatctgctatagaatgcaga
tttgactttaaaccacattatgcaacaagggtttgcctgcatttaaaatcaaaaatgatt
tctcagtccaagtctgacactgacacaaccgcagcaatcatagcaccaccccataatccc
attcctgttggccacagttctgtttccatgatggaaaatttgtttaatttaggaatggag
gaagcaaccaaaggagatgcagatgatgagggagctgacattgacactatggcaaataat
gaggtttcagcctacctaaaagagaactccaataacacagacgtgttagacatttgcctg
aaatacctttcgctgccagcatcatctgcagcatcagaaaggtgcttctccagcgcaggg
ctaactgctaccgtcttgagatctcgacttaccggaagtcacttagaagcattaaatatt
ctacattgcaacaagcaactccttgattaa
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