Clavelina lepadiformis (light-bulb sea squirt): 143458759
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Entry
143458759 CDS
T11416
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143458759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clep03041
]
143458759
Spliceosome [BR:
clep03041
]
Common components
Common spliceosomal components
SR proteins
143458759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
143458759
NCBI-ProteinID:
XP_076811730
LinkDB
All DBs
Position
5
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AA seq
231 aa
AA seq
DB search
MSRSDCRVYVGNLPPDVREKDVEDLFWKYGKILNVNLKNRRGPPFAFVEFDDHRDADDAV
RGRSGYNFDGYRLRVERPRGNSSYNTRPRYVSTFRAQGGPPSRRTKYRVVVSGLPPTGSW
QDLKDHMRQAGDVCYADVYKDGSGIVEFVGREDMDLAVKNLDDTKFKSHEGETAYVRVKY
DDDRDGSPRRSRSRSRRRSPSYSPRRSSSRSRSRSYDKYQRRSSYSRSRSP
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagtagatctgattgccgcgtttatgtgggtaacctgccacccgatgtgcgtgagaaa
gatgtggaagacctcttttggaaatatggcaaaattcttaatgtaaatttaaagaaccgc
cgaggaccgccatttgcctttgttgaatttgatgatcacagagatgcagatgatgctgta
aggggaaggagcggatataattttgatggatataggctacgggttgaacggccaagagga
aattcttcatacaatactagaccaagatatgtatctacattccgtgctcaaggtggtcct
ccatcacgtcgaacaaagtatagagtggtcgtttcaggtcttcctcctactggaagttgg
caagacttaaaagaccacatgcgtcaagctggagatgtttgttatgcagacgtctataag
gatgggagtggcattgttgaatttgttggcagagaagacatggacttggctgtcaaaaat
cttgatgatacaaagtttaaatcacacgagggagagaccgcgtacgttagagtaaaatat
gatgatgatcgtgatggctcaccaagaagatcgcgatctcgcagccggagaaggtctcca
tcgtattccccacgtagatcaagctctcgttccagatcacgttcttacgacaagtatcaa
aggcgttcttcatattcacgctctcggtctccctaa
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