Clavelina lepadiformis (light-bulb sea squirt): 143458801
Help
Entry
143458801 CDS
T11416
Name
(RefSeq) pinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clep04030
]
143458801
G protein-coupled receptors [BR:
clep04030
]
Rhodopsin family
Vision
Opsin
143458801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
143458801
NCBI-ProteinID:
XP_076811787
LinkDB
All DBs
Position
5:2548578..2552290
Genome browser
AA seq
348 aa
AA seq
DB search
MVSTQTPYNESTNPYVLYGDGWVPDYVEIVSRGYYTFLAVYMTVLFILSCFFNSVVIVAT
IKYKKLRKPINYLIVNLAVADLANASIECLISIFTNAVGYFYLGKYVCQFLGYTVSVFNR
LGIVGLLSISVMAFERFLVVCKPFGPRRFEHKQALIGIAFTWTWSIIWNTPPLVLWDGYV
PEGVGTSCAPNWLSEGLRERIFLLVYFNTCFFVPLAVIVVCYGKIIALLRQFARNNSLPE
NTRAEAKVTKLTAIMGVAFLLSWLPYAGFAMYNVFNPDSQMKFAFGSIPAYFAKSALIYN
PLINVGLNQQFRKCVIRMFISDRNRVENHVSKKQQTERSCLSEVKVRP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggttagtacccaaacaccctacaacgaaagcacaaacccttatgtgttgtacggagat
ggatgggtgcctgattacgttgaaattgtcagcagaggatattacacatttcttgcagtt
tacatgacggttcttttcattttgtcctgcttctttaatagcgtcgtgattgtggcgact
ataaaatacaaaaaacttagaaagcccatcaattaccttatagtcaacctggctgtggct
gacttagccaatgcatcaattgaatgcttgatttctatctttaccaacgcagtcggatac
ttttacttgggaaaatatgtctgccagtttttaggatatacagtgtccgtttttaatcgt
ttgggcatcgtgggcttactttcgatctctgtgatggcatttgagcgttttttagttgtc
tgtaaaccgtttggacccagacgttttgagcacaaacaagcattaataggcatagcattt
acatggacatggtcgataatttggaacacaccgcctttggttttgtgggatggatatgtc
cctgagggcgttggcacaagttgcgctccgaactggctttccgaaggtttgagagaaaga
atatttttgctggtttatttcaacacctgcttttttgttccgttggcagtaattgtagtt
tgctacgggaagattattgcccttttgcgtcagtttgccagaaataattcacttcctgaa
aatacaagagcggaggccaaagtgactaaactgaccgcaattatgggagttgcattttta
ctaagttggttgccgtatgctggctttgctatgtataatgtctttaacccggactcacaa
atgaagttcgcttttggaagcatcccagcatattttgccaaatcagctcttatatacaat
cccttgataaatgtcggtttaaatcaacagtttcggaaatgcgttattcgcatgtttatc
tctgaccgaaacagagtggaaaaccacgtcagcaaaaagcagcaaacagaacgaagttgc
ttgagtgaagtcaaagttagaccataa
DBGET
integrated database retrieval system
