Clavelina lepadiformis (light-bulb sea squirt): 143458920
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Entry
143458920 CDS
T11416
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clep01001
]
143458920
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clep04121
]
143458920
Enzymes [BR:
clep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
143458920
Protein kinases [BR:
clep01001
]
Serine/threonine kinases: Other
Other
143458920
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
143458920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH
SWIB
Motif
Other DBs
NCBI-GeneID:
143458920
NCBI-ProteinID:
XP_076811942
LinkDB
All DBs
Position
5:8803340..8814034
Genome browser
AA seq
1537 aa
AA seq
DB search
MATPDDYRGEINKIFEEWNENRTNEHYDVVPFLTQLSERFEKEAEEFHKQDPDPFDDRHP
AYTMPTCAFGKLLKALTRQEDFLDAVVNTYLKSRSRSTTHPDTGLLRPSTAEATARLLLT
IMPGLDSQSIFTNSSDILPLLYDWAKNGSETLRTYATGILASAAEHQEVNSQHTSENATL
VPILLKRLWNYIQSGRYSSEKSDVLTISNSSSDSLKVIIKSQSQQSTCKPGKSGAGRSQT
KDNDGIVKSSKKRKLSGDNVKKTKSRKIDDKSKKAQHSKGCEQTASSVPRSRLFSSQRKA
DLLVMPSSDLIDINDCSNSSWAEILPIVIGGSHSLEPPLNPTICERYILNLLIPLGEYQD
LLSHFIEHHAIDLVNHYLEHSHTNNGLLTFSAMRFFASLLCHNKIATAFIEDNGVQRLLS
VRRPSIGATGASLCLYYLAYNQDAMERVCQLPNKVLNDLVKYAVWLLECSHDSGRCHAAL
FFYISFQFPIILKLFDQKNGLRCLLNILSTLPIIRLDEPPRKEDEDTYRQTARTILTALR
KYFEAHLVSKAASMKEIVQIDKSNQLLQRNTSKVINCDRENVLEHLDFLLTIDQRNYQTS
MSPSVSLINWTPVQSFLKLEGVSLLLRLIALACDWTNYWEWGKAEVVRFALDCLVVVSLS
REAQLVLCNPVSLPSSFTEETGISIVLGVAEGEAYLGKEPEAQKSALSVVVNCVCGSEYK
TDGAMAKMVNGIPQLKLVSKSHDESRKLLWDAVKTNNGIKILLQLLISTHPAVHADDIRL
LACKALCGLSRCESVKQIMSKLPMFNNGQLQALTKQPVMQDRRKQHVKFCIYVEDLTEKV
SGKPSTLQMDLDSLRKAHIVSQTMIRYDNRELLQLIHNHLSWSGLHSTASMLAREASLHI
PTTSSTSLLSTPRNISRTGAGDSPYISPVSRRISFSRGAHAHGETPALNSHSSLIFTPNQ
RKGRFKFKADPSNSSDIFVNPRHTCHLSSNGRITVVEPGLLDGLADSRRNTPCSSATLNT
IVAEYLKNQHSHCKNPVVTVPEFSLLRPHYCPEPRFRVEAPLNISSRSMRRQVAPKAGGI
GGSACDRHFIYSRFRPNLVFRAPEEENVPYTCCNFTPDNLSVILGNYQGDLTIHSIQSEQ
DRVLEGVANAPIVKVEPARDGKRLLIVEDGMWRRNCSLYSMHTSATEFTFGDCSHVEFPK
VTQNSVLGTKGSAAIIYDAESGQKIRKLERVDLASNYTNNQATFSADDELILSDGLLWDA
RVNGNKPIHKFDKFNSSISGVFHPKGLEVIINTEIWDLRSYHLLHTVPMIDQCTVTFNGD
GTILYATKSVSNQDLEDIDEDDLEAGSTTFHAIDAHDYRPLSVTDTKHKIYDFAADRRDS
FVAVVERQNGQWDQWDGPSMSVCRLYEVGRVRGEDEEDEQGDENVVDDNNDDDYNDNDND
DRDLNSDDDDDISFSETGSGSSFDIPSFAFPLSSDGESLNGRRSRRSRRQRRTRRRNGSP
VVNDDQDDDTINDDAGWSTIDDDSSSDDSFYFPVNRH
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcctgatgactacagaggggaaataaataaaatatttgaagagtggaatgaa
aatcggacaaatgagcattacgatgtggttccatttttaacacaattatcagaacgcttt
gagaaggaagctgaggaattccacaagcaagatcctgacccatttgatgacaggcatcct
gcctacaccatgcctacctgtgcatttgggaagcttcttaaagctctaacaaggcaagag
gactttttggatgccgttgtaaatacatatcttaaatcgagaagtcgttctactacccat
cctgacactggtcttttgcgaccttctaccgcagaggcaacagctcgactattgttgaca
attatgcctggtcttgattctcagagcatttttacaaacagttctgatatcttacctcta
ctttatgattgggccaaaaatggttccgaaactctaagaacatacgccactgggatcctt
gcaagtgctgctgaacatcaggaagtcaattctcaacacactagtgaaaatgccacattg
gttcccatcttgttgaagaggttgtggaattacattcagtctgggaggtattcttcagaa
aaatcagatgttcttaccatctctaattcttcgagtgattcgttgaaagtcattataaaa
tcccaatcacagcagtctacctgcaaacctggaaaaagtggtgctggcaggagtcaaaca
aaggacaatgatggcattgttaaatcaagcaaaaagagaaaactatctggagataatgtt
aaaaaaacgaaatcgcgaaaaattgatgacaaatcaaagaaagcacaacattctaagggt
tgtgaacaaaccgccagctcagtgcccaggtccaggttgttttccagtcaaagaaaagct
gatcttttggtcatgccttcttctgatctcattgacataaatgactgcagcaacagtagt
tgggccgaaatccttccaattgtgatcggcggcagtcacagtttagaaccacctttgaac
cctaccatttgtgaaagatatattctaaacttgctaatacctttgggtgaatatcaagat
cttttgtcacatttcattgagcatcatgcaatagatttagtaaatcactaccttgaacac
agtcataccaacaacgggctgctaaccttttctgcaatgagattttttgcatccttactc
tgtcataataagattgctacagcatttattgaagataatggtgtccaaagattgttgtct
gtgagacgcccatcgattggtgctacaggtgcttcattatgcctttactacctggcttat
aaccaagacgcaatggagcgggtgtgtcaacttccaaataaggttttaaatgacctggtc
aaatatgccgtgtggcttcttgaatgttcccatgactctgggcgctgtcatgctgcttta
ttcttttatatatccttccaatttcctatcattctcaagttgtttgatcagaagaatggt
ttgagatgcctccttaacatactgagtactcttccgataattcgtcttgatgaacctcca
aggaaagaagatgaggacacatataggcaaactgctcgcacgattttgactgctttgaga
aagtatttcgaagctcacttagtatccaaagccgcttctatgaaggagatagtgcaaatt
gataaaagcaatcagctcttacagcgcaacacatccaaggttattaactgtgaccgtgag
aatgttctggaacacttagattttcttcttactatcgatcaacgaaattatcaaacttcg
atgtcaccatcagtctctttaataaactggacaccggtgcagtcatttttgaaactagaa
ggagtttcattacttttaaggctgattgctctagcctgtgattggacaaattactgggaa
tggggcaaagcagaagttgttcgttttgctcttgattgtcttgttgtggtcagtctttct
cgggaagctcagcttgttctttgtaatcctgtcagtcttccttcttcatttactgaagaa
acaggaataagcattgttcttggagtggcagagggagaagcttacctggggaaggagcct
gaggcacaaaagtctgcactttctgtcgttgtcaattgtgtgtgtggttctgagtataag
actgatggtgctatggcgaagatggtgaatggaattcctcagttaaaactcgtgtcaaag
tctcatgatgaatcgagaaaattactttgggatgctgtgaagaccaacaatggcatcaag
attcttcttcagctactaataagcacccatccagcggtgcatgccgatgatattaggctc
ttagcatgcaaggcattatgtggcctttcaagatgcgaatccgtaaagcaaatcatgtcc
aagctgcccatgtttaataatggtcaacttcaggcattaactaagcaacctgtcatgcag
gacagacgcaagcaacatgttaaattctgcatatatgttgaagatcttacagagaaagta
tctggaaaaccaagcacactgcagatggatctggattctttgagaaaagcccacattgta
tcacagacgatgattcggtacgataaccgtgaactccttcaactcatccataatcatcta
tcgtggtcgggattacattccactgcatctatgctagccagggaagcatctttgcacatt
cctaccacttcaagcacatctctcctctccacaccaagaaacatttctcgaactggagcc
ggtgattctccttacatttccccagtcagtcgtcggatcagctttagcaggggtgcgcat
gctcacggtgaaacacctgctcttaattctcattcatcgcttatttttactcctaatcag
agaaaaggaaggtttaagttcaaggcagatccgagcaattcgagtgacatttttgtcaat
ccgcgacacacgtgccatctctcttcgaatggccgtatcactgtggttgaaccaggcttg
ctggatggtcttgcagattcacgcagaaacacaccttgttcatctgcaacactgaacacc
attgttgctgagtatcttaagaatcagcattcccactgcaagaaccctgtggtgaccgtg
ccagagttttcacttctgagacctcactactgccctgaaccaagatttcgtgtggaggca
ccgttaaatatttcttctcgttccatgaggagacaagtggcccctaaagctggaggaatc
gggggatctgcatgtgatcgtcattttatttacagcagatttcgacctaacctcgtgttt
cgtgcgcctgaggaggaaaatgttccatacacatgctgcaatttcactcctgacaacttg
agcgtgattctgggcaactaccaaggcgacctcaccatccatagcatacagtccgagcag
gaccgtgtattggaaggtgtagctaatgcacccattgtgaaggtagaacctgcccgagac
ggcaaaaggttgctgatagtggaagacgggatgtggcgccgtaattgcagcctttactct
atgcacacttccgctaccgagtttacattcggcgattgttcacacgttgagtttcccaaa
gtaacacaaaattcggtcttgggaacgaaaggttcagctgcgataatatatgacgccgaa
tccgggcaaaagattcgtaaactggaacgagttgatttggctagcaactacaccaacaac
caggcgactttctcagcagacgacgaattgattttatcagatggtttgctgtgggacgct
cgagtgaacggcaacaaaccaatccataagtttgacaaatttaactcaagcatttcggga
gttttccatccaaaagggctggaagttatcataaacacagagatttgggatttgagaagt
taccacctcttacatacagtacccatgatcgaccaatgtacagtcacttttaatggtgat
gggacgatactctatgcaacaaagtcagtatcgaatcaggacctggaagacatagatgaa
gatgatctggaggcaggttccacaaccttccacgcgatcgatgctcacgactaccgacct
ctgagcgtgaccgacactaaacataaaatttacgactttgcagccgaccgcagagacagc
tttgtggccgtggtagagagacagaacggacagtgggatcaatgggatggcccctcaatg
agcgtctgcagactttatgaagttggaagagttagaggtgaagacgaagaagatgaacag
ggagatgagaacgttgtggatgacaataatgatgacgactataatgataatgacaatgac
gatcgtgatctcaactccgatgatgatgatgatatttctttcagcgagaccggaagtggt
tcctcattcgatattccttcttttgccttcccattatcttcagatggagaatcattaaat
ggaagaagatctcgccgcagcagaagacagaggcggactcgaagaagaaatggttcccca
gtggtaaatgatgatcaagatgatgacacaattaatgacgatgctggttggtccactatt
gatgatgacagttcgtctgacgacagcttttattttccggtcaacaggcattga
DBGET
integrated database retrieval system
