Clavelina lepadiformis (light-bulb sea squirt): 143458923
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Entry
143458923 CDS
T11416
Name
(RefSeq) tyrosine--tRNA ligase, mitochondrial-like
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
143458923
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clep01007
]
143458923
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clep03016
]
143458923
03029 Mitochondrial biogenesis [BR:
clep03029
]
143458923
Enzymes [BR:
clep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
143458923
Amino acid related enzymes [BR:
clep01007
]
Aminoacyl-tRNA synthetase
Class I (A)
143458923
Transfer RNA biogenesis [BR:
clep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
143458923
Prokaryotic type
143458923
Mitochondrial biogenesis [BR:
clep03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
143458923
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
VF530
Motif
Other DBs
NCBI-GeneID:
143458923
NCBI-ProteinID:
XP_076811950
LinkDB
All DBs
Position
5:8838724..8842949
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AA seq
509 aa
AA seq
DB search
MSNSACRLHSCLRPFCVKSMVYHCCHSWLHLLRNTSQVAVRHLSTNNSTFSKENVLPKNI
LHLHERGMFQDIYPPASVNLPNLLKKKQCFYCGFDPTASSLHVGNLLSLMALLQCQRAGH
NVIAVIGTATARAGDPSAHTKDRSILSKKDLFANAYSISESLERIVKNHEKHLYDNRLKK
ILPGFKILFNHTWYEKENVIDFMGTVGRDFRIGPMLEKRYIKDRINSLEGLVLAEFVYQI
FQAYDWKYLRENYNCCFQIGGSDQLGNINAGYELIKKRYKEELYGLLTPLVTTLRGEKLG
KSAGNTVWLNPDKTSPFEFYQYFYRQPDKVVEQFLKYFTFIDLNQIEDIIEEHKKKPQLR
KAQRILARNVCKIVHGEIGLISAERCSRVLYEGRIDDLEQLSDDEIAATFLGMNIIHGVL
EPDTTVYDLVANIVEAIPQGTKGENIILGGGVRINGRIVDFPHQILLSDIHVLKNDLTLV
TVGKVHHYVVRWKLPRIEHDEDDDKLPSV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactctgcatgtcggttacattcttgtttgaggcctttttgtgtcaagagtatg
gtttatcattgttgccatagttggttgcatctgttaagaaacacttcccaggttgctgtt
cgacacctttcaaccaataattcaacgttttccaaagaaaatgttttaccaaaaaatatt
cttcatctccatgaacgtgggatgtttcaagacatatatcctcctgcatcagtgaattta
cctaatctcttaaagaaaaaacagtgtttctattgtggctttgatccgacagctagtagc
ctgcatgtaggaaaccttctttccctgatggcgctcctgcaatgccagagagccggtcac
aatgtcattgctgttattgggactgcaacagccagagctggtgacccaagtgcgcatact
aaagatagaagtattttaagcaagaaagatttgtttgcgaatgcctattccatttctgaa
agcttggaaagaattgtcaaaaatcatgaaaagcatttgtatgataatcgattgaagaaa
atactgccagggttcaaaattttatttaatcatacctggtatgaaaaagaaaatgtcatc
gactttatgggcacagttggaagagactttcgaattggccccatgcttgagaagaggtac
atcaaagatcgtatcaatagccttgaaggcctggtgttagcagagtttgtgtatcagatt
tttcaagcctatgactggaagtaccttcgtgaaaattacaactgctgctttcaaataggt
ggaagtgatcaacttggaaatataaatgctggatatgagttaattaaaaagagatataaa
gaagaactttatggtcttttaacaccactagtcaccacattacgtggagagaaattaggc
aagtctgctggaaacactgtctggctgaatcctgataaaacatcaccttttgaattttat
cagtacttttatcggcaaccagataaagttgttgaacaatttttgaaatatttcactttc
attgatctgaaccaaattgaagacattatagaagaacataagaaaaagccgcaattgaga
aaagctcagagaatacttgccaggaatgtctgcaaaatcgtacatggggaaattggattg
atatctgctgaacggtgtagcagggttctttatgaaggaagaattgatgatctagaacag
ctttcagatgatgaaattgctgctacctttcttggaatgaacattatacatggggtgtta
gaaccagatacaactgtgtatgatttagttgctaatattgtggaggcaattccccagggc
acaaaaggagaaaatatcattcttgggggaggagtgaggataaacgggagaattgtagat
ttcccacaccaaatccttttatcggacattcatgtcttaaaaaatgacctgacattagta
acagttggcaaggtacaccactatgttgtgagatggaagttgccaagaattgaacatgat
gaggatgatgataagctgccatcagtctga
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