Clavelina lepadiformis (light-bulb sea squirt): 143459040
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Entry
143459040 CDS
T11416
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like protein
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clep03021
]
143459040
Transcription machinery [BR:
clep03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
143459040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Motif
Other DBs
NCBI-GeneID:
143459040
NCBI-ProteinID:
XP_076812114
LinkDB
All DBs
Position
5:13590118..13613920
Genome browser
AA seq
2207 aa
AA seq
DB search
MATANFLETRWLKRQKLGPPDVYPQDPKQKEDELTSVNVKQGFINPTLFNDEYSSAHSYN
IDSNKISQSFSHLLTQKQIFNTYNDAAKRRPQVGKENFYLVPVINPKVRNHLQNWFKDLS
SSKSLSLLSKRVPVFSKKEDIFQSLAEYDVPLVRSTWFIKMSAAYHLTQTDVKNKKRAAN
DPNSDWTQAICKFMREQLTKLNEGNAFAKTNGTLSQHISLLPGSVGSGTVAYLNPPTVIA
RDDFEKQSQYISNLAHHMYSEDLLDKHEFLTWLVEEFELIPLYDEIALSYFMPFVLQYIE
EVVKNQLLARRMCFTAAHHLNWIFLDNYSLRSDSPSMQSGLHASNLSQSAQNGIYPAQQQ
LQQQCPAHLHSIAHTLASVIQCTTLSCPGALVWYPPVDPRTCGSPMDLLPCAPSALLLPD
LDKNDEVGHHEDTTTRNVLYEKEVEIVQRSTAAELRWSSAKCQESNAGHTINRVLTSLEA
LDKHRFSHRDSLMSLYHKIFDQTLGKDLDMQVSKSSEEAVIGLLCEWAITAKRLGEHRAA
VVAKLLDLRQAFYEREQQPTGANINESTSSNSSQQPGSAPDMSSFMETSVSQNQASRPMP
RFQSLLFTFLDTQAPELNDPNNAEQLQEFKNLVLLFSELIEHDVFAYDQYLNMLISRGDI
CPGQIASLPSYAVPTPQSDLNLSSNSNLDRSISSNPGMLSSGLLENRHLDGLRMDGSHDP
SNSMLMVHSSKMDPSEHEFLPGHDSMFNPDQRSDRHFLDAVRPIDKKSNSSKVTAGNGLS
NSSSSLTQLGSLWGYHQPRHVQYIMHFPLPYQDDDITYEWNQRLVALYGAGRQKTFVKKA
VRKITRHLIKLIQNKRGVDEKDYIQPVSWGPPGKKGKVKSTSSHAELLSRYRALSYFDQH
MVTAHVAKALLACLGNYTSGRSMILPNLNVVMLLFDLMQEALNISGMVQTAVSICTALAS
LSSAIKQKKHDMKSFKTTDAWYCTELSHIVVAIVWNYQSYLNLYTDLTVEAFDGFFSLAK
ESFLYSPAQCTSSDRIILTFMYEIYCLLSVKSHTPLSESLAAFGNYALPVKQTLFNTKKP
AASNYRYDTTFMRDFLENPDAESPLSVAECYGDKLRDMTCRYSFVCTAIISVCCGQQNLK
KVNALASFCAEMNARCNELSAEWLGVLKALCSSSSCATSSFNDVLLNVDASDAQIRNPLA
LFTAVLIARGCLSFSDVIKHVAIPSLLRRCQSNASTLDTGARLTCHLLLQLFKAPNATNT
SNTKYSFYLPSSSDRHLLATAQHNIEVGAVVAVLKSVLKLGDTSRSSERNIYKLDGDDND
GVTSFLAPIHDFDDFDIRMDTNTIDHSVDKNQNSLDGASLSEFAKHTLRVICAQQWVRER
CLKESFLDHLMDQILTREQRQNLIQLILYPEEDVKQRLSSLSGDPRSYVVDILASMTRWT
LRQRMLELQAMLHESPQEKSLPEHIAKATIEVFQQQQFMEATRERKYLTGPELDRCNVWL
VAPLVSKLSTQVQGRVLQEASDILEARKNWPTSSTRSAVNVRADHDGEQHCSGSSLLNHQ
PFLTLILTCLNSLKAKDQDEQRDSLLESLQSQIVMLHTEWHSAWNQRDIGKDMPLLSSSQ
NGVHDALQLRLSLVGGMFDTVQSNSQWTSDVVVLLTTLINSGMVDVQINADLFNTVYDMI
AVLLHHTLGGDEPSRAEGSKREYMNIVKKMKKEIGENQTESIKQLRQLLPIHRTDVYIVC
CEPIGPLMDVKGNKVPVPVDGNHGLQVASKQKLNVWEIIEGLKNPAPLCLAWFGARKTER
KVLFYEQEQALLLYHEHGNKRSLDEFLKPPQLPPEEEIIAKTPPPPKTSERKTSISKIAA
SGSGTNTSTQNEMKRPPVKNPRKRPSRSRSKGPEPPLGPAFSRPITNTPGLSGPGNPAGN
IINQMAQVQTSNFTGFTTPNPPSYVSFQQHTNLANPFPASGFSAQQRNLTATPAKEALVN
HVRNRIANNAFNDTRIRQRAEPVKTGVHKVYNLQQRQGIPRQHIVNQPQSNQSYTTYGHQ
QNQQTGMVQNYNQSIYRNTNAPSGPMGYQHTNVGGRQPNPQYISQQQRQLRNPSYNIQQT
YAGQQQQQQQQQMMGMQTQQAQQQTQYGMNQLQNRSAQLNRLGQQQMGVHQINSSQTIQG
GGMGQRQMIDHQQMMNTPQYGQQMQTNQQQASGMMGMRQNMIQPPQY
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaaattttctagaaacaagatggctcaaacgtcaaaagctcggacctcct
gacgtgtatccacaggatcccaaacaaaaagaggatgaactcacttctgtcaacgttaaa
caaggatttattaacccaactctttttaatgatgagtactcgagcgcacattcgtacaac
attgattcaaataagataagccagagctttagccatttattgacccaaaaacagatcttc
aatacatacaatgatgctgctaaaagaaggccacaagttggcaaagaaaacttctatttg
gttcctgtgataaacccaaaagtgcgtaatcatttgcaaaactggtttaaagacttgtcc
tcaagcaagtctttgtctctcctttcaaaaagagtgcccgttttcagcaaaaaggaagat
atttttcaaagcttagcagaatatgatgttccacttgtacgttcaacatggttcatcaag
atgtctgctgcttatcatttaactcagactgatgtgaagaacaaaaaacgagctgcaaat
gacccaaatagtgactggactcaggcaatctgcaagttcatgagagaacagctcaccaag
ttgaatgaaggcaatgcttttgccaaaaccaacggtacactttcacaacacatttcttta
ttgcctggttcggttggatctggaactgtagcatatttgaatccaccaacagtcattgca
agagatgactttgaaaagcagtcacagtatatttctaatcttgctcatcacatgtactcc
gaggatttattggataaacatgagtttttaacatggctggtggaagagtttgaacttata
ccactttatgatgaaattgcactgagctactttatgccatttgttctgcagtatattgaa
gaagttgtgaagaatcagttgttagcaaggagaatgtgttttacagctgctcaccatttg
aactggatatttttggataactacagtttaagatcagattcaccatcaatgcaatctggg
ttgcatgcatccaatctatcccagtcggcacaaaatggtatttatccagctcagcagcag
cttcaacagcagtgtccagctcatttgcattcaatagctcacacacttgcttctgttatc
caatgcactaccttgtcttgtcctggagctttggtttggtatcctcctgttgatcctaga
acatgtggctctccgatggaccttcttccatgtgctccatctgctcttcttcttcccgat
cttgataaaaatgatgaggttggacaccatgaagatacaacaactagaaatgttctgtat
gaaaaagaggtggaaattgttcaacgatcaactgctgcagaattgagatggtcttctgct
aagtgccaagaatcaaatgcaggtcatacaatcaatagagtcctaacctcacttgaagcc
ctggacaaacatcgatttagtcacagagattcgctgatgtctctctaccacaagattttt
gaccaaacacttggcaaagatcttgacatgcaagtttccaagtcaagtgaagaggctgtg
attggcctgctttgtgaatgggccatcactgcaaagaggttaggagaacatcgagctgca
gtggttgccaagttgttggatttgcgtcaggcattttatgagcgtgagcaacaaccaact
ggtgctaacatcaatgaatccactagttcaaatagcagtcaacagcctggttctgcacca
gacatgagttcttttatggaaacatcagtgtcacaaaaccaagcttccagaccaatgcca
cgttttcaaagtctcttgtttacattcttggatacacaagcaccagaattaaatgatccc
aacaatgcagagcaattacaagaattcaagaacctggtgttgctcttttcagaattgata
gagcatgatgtttttgcatatgaccaatacttaaatatgcttatatctcgtggcgatatt
tgtccaggacaaatagcttcactaccatcttacgctgtgcccactccacagtctgactta
aatcttagctctaattcgaacttggatcggagtatctcttcaaatcctggcatgctaagc
tctggcttgctcgaaaatcgacatctggacggattacgcatggatggaagtcatgatcct
tctaacagcatgcttatggtacattcatcaaaaatggatccatccgaacatgagttctta
ccaggacatgatagtatgttcaaccctgaccagagaagtgatcggcatttcttagatgca
gtaaggccaattgataagaaatctaactcttcaaaagtaacagctggcaatggcttgtct
aattcttcgtcatcactgacacagctaggtagcttgtggggatatcaccagcctcgtcac
gtccagtatataatgcattttcctctgccatatcaggatgatgacataacatacgagtgg
aaccaacggctagtagcactatatggggctggacgtcagaaaacgtttgtgaagaaagct
gttaggaaaattactcgtcatttgatcaagcttattcaaaataaacgtggtgtagatgaa
aaagattatattcagcctgtgtcgtggggtccacctggaaaaaagggaaaggtcaagtcc
acttcatcacatgctgaacttctttccagatatcgagcgctgtcatatttcgatcagcat
atggttactgcacatgttgccaaagcgcttcttgcgtgcttgggtaattatacatctgga
agatcaatgattctgccaaatctcaatgtggtcatgttattgtttgatctaatgcaagaa
gccttaaacattagtggaatggtgcaaactgctgtgtctatctgtactgcactggcgtct
ttgtcctcggctataaagcagaaaaaacatgacatgaaatcttttaaaacaactgatgct
tggtactgcactgaactttctcatatagtagttgcaattgtatggaattatcaaagttac
ctcaatctttatacggacttaacagtagaagcatttgatggatttttttcactagcaaaa
gaatcttttctatatagtccagcacagtgtacatcctctgataggattatcctaacattc
atgtatgagatatattgcctgctgtcagtaaaaagtcacactcctctctctgaatccttg
gcagcatttggtaattatgctttgccagtaaaacaaactttgtttaatacgaaaaagcca
gcagcatctaattacagatacgacacaacatttatgcgtgatttccttgagaatccagat
gctgaatccccattgtcagtagcagaatgctatggagataaactacgtgacatgacgtgt
cgttacagctttgtatgcacggctattatttcagtttgctgtggacagcaaaacctcaaa
aaggtgaacgcacttgcttctttttgtgctgaaatgaatgctcgctgcaacgaactcagt
gcagaatggttgggagtcttaaaagctctgtgttcctcctcctcttgtgctacgtcttct
tttaatgatgtcttgcttaatgtagatgcaagtgatgcacaaatacgcaatcccttagca
ttatttacagctgtgttgattgcaagaggctgcttgtctttttctgatgttataaaacat
gttgcaattccatctcttttgcgcaggtgtcagtccaatgcgtccacattagatacaggg
gcccgtttgacttgtcatcttttgttgcaacttttcaaagcaccaaacgcaacaaacacg
agcaatacgaagtactcgttttacttgccatcttcgtcagacagacatcttcttgcaaca
gctcaacacaacattgaagttggtgcagtagttgccgtgctgaaatcagttctcaagcta
ggtgacacaagtcgttccagcgagaggaatatatacaaactcgatggtgatgacaatgat
ggagtcacaagctttctcgctcctattcatgatttcgatgattttgacatccgaatggac
actaacacaattgatcacagtgtggacaagaatcaaaactcactggatggggcaagctta
agcgaatttgcaaaacacaccctgagggtcatttgtgcccaacagtgggttagagaaaga
tgtttgaaagagagtttcttggaccatttaatggaccagattttgacgagagagcaaaga
cagaacttaatacaattaatattgtacccagaggaagatgttaagcaaaggctttcctca
ttgagtggtgatccacgcagttatgttgttgacatattggccagtatgacaagatggaca
ttgcgccaacgcatgctggaattacaagccatgctgcatgaatcccctcaagaaaagagc
ttaccagagcatattgcaaaagccacaatcgaagtttttcagcaacaacaattcatggag
gctacaagggaaaggaaatatcttactgggccagagcttgatcgatgtaatgtgtggttg
gttgcgccactagtgagcaagctttcaactcaggtgcagggaagagtactgcaagaggca
agtgacattcttgaagctcgaaagaactggccaaccagttcgacacgtagtgctgtgaat
gtgagggccgatcatgatggagagcagcattgtagcggttcatccctgttgaaccatcaa
ccctttctaactttaattttaacttgtctgaacagtttaaaggcaaaagaccaagatgaa
caacgagattcattgttggagtcgcttcagtcgcaaatagtcatgcttcacaccgaatgg
cacagtgcgtggaatcaacgtgacattggaaaagatatgccattgctgagctcctcacag
aacggcgttcacgatgctttgcaacttcgtctcagtctagtcggcggtatgtttgatacg
gtgcagagcaactcacaatggacaagtgacgttgtcgttctacttacaactctaatcaat
tctggtatggttgacgttcagatcaatgctgacctctttaacactgtttatgatatgatc
gctgttctcttgcatcatactttgggtggagacgaacctagtagggcagaaggcagcaaa
cgcgaatatatgaacattgtaaaaaaaatgaagaaagaaattggtgagaatcagactgaa
agcatcaaacaacttcgtcagttgcttcctatccaccgaaccgatgtttacatagtttgt
tgtgaacccatcggaccactaatggatgtgaaaggaaataaggttcctgtaccagtcgat
ggcaaccatggcttgcaagttgcatcaaaacagaagcttaatgtctgggaaataatagaa
ggactgaaaaatcctgccccgctttgcttagcttggtttggagctcgaaaaactgaacga
aaagttttattttatgagcaagaacaagctcttctcctctatcatgaacatggaaataaa
agaagtttagacgaatttctgaaacctcctcagcttcctccagaagaagaaataatagca
aaaactccacctccacctaaaacctccgaacgaaaaacctctatatctaaaatagcggcc
tctggttctggaacaaacacttcgacacagaatgaaatgaaacggcctccagtgaagaat
ccaagaaaacgcccatcaagatcacgttcaaagggacctgaacctccactggggccagcc
tttagtagaccaataacaaacactcctggtctatcaggacctggtaatccagcaggaaat
attattaaccagatggcacaggttcaaaccagtaattttactggttttactacaccgaat
cctccgtcatatgtttcattccagcagcacacaaacttagcaaatccttttccagcgtct
gggttttcagctcagcagagaaatcttactgctactccagcaaaagaggctttggtgaat
cacgtcagaaaccgtattgcaaataacgctttcaacgatactagaattcggcagagagct
gaacctgtgaaaactggcgtgcacaaggtgtacaatttacaacaacgccaaggcatacca
cgacagcacattgtcaatcaaccacaatctaatcagtcctacacaacctacggccatcag
cagaatcaacaaactgggatggtgcaaaattacaaccaatcaatatacagaaatacaaac
gccccaagtggcccgatgggttaccagcacactaacgtcggtggaaggcagccaaatccg
caatacatcagtcaacaacaacgtcagttgcgtaatccaagctacaatatacaacaaact
tatgctggtcaacaacaacaacaacaacaacaacagatgatgggaatgcaaacgcaacaa
gcacaacaacaaactcaatatggaatgaatcagctccagaataggtcggcacaactgaac
aggttgggacaacaacagatgggtgttcatcaaataaacagcagccagacaatacaaggc
ggaggaatgggccagagacagatgatagatcatcaacaaatgatgaacaccccgcaatat
ggacaacagatgcagaccaaccagcaacaagccagtggcatgatgggaatgcgacagaac
atgatacagccaccacaatattaa
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integrated database retrieval system
