Clavelina lepadiformis (light-bulb sea squirt): 143459320
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Entry
143459320 CDS
T11416
Name
(RefSeq) tubulin alpha-1D chain-like
KO
K07374
tubulin alpha
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04145
Phagosome
clep04517
IgSF CAM signaling
clep04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
143459320
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
143459320
09142 Cell motility
04814 Motor proteins
143459320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143459320
03036 Chromosome and associated proteins [BR:
clep03036
]
143459320
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clep04812
]
143459320
04147 Exosome [BR:
clep04147
]
143459320
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143459320
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
143459320
Cytoskeleton proteins [BR:
clep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
143459320
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143459320
Exosomal proteins of other body fluids (saliva and urine)
143459320
Exosomal proteins of colorectal cancer cells
143459320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
143459320
NCBI-ProteinID:
XP_076812529
LinkDB
All DBs
Position
5:complement(21765936..21770190)
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AA seq
452 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEIRSGTYRELFHPEQMITGKEDAANNYARGHYTTGKEMIDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYVNLNRLMAQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGLDSMEGEADEDDEEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctcagtccacgttggtcaagccggtgttcaaatcggtaacgcttgc
tgggagttgtactgccttgaacatggcatccagcctgatggtcagatgccaagtgacaaa
accatcggaggcggagacgattccttcaacaccttcttcagcgaaactggcgctggcaaa
cacgtgccaagagccgtatttgtcgatttggagccaacagtagtcgacgagattaggagc
ggcacataccgcgagctctttcaccctgaacagatgatcaccggcaaggaagacgccgcc
aacaactacgctcgtggccactacactaccggaaaagaaatgatcgacttggtcttggac
aggatccgcaagctcgccgatcaatgtaccggtctccagggtttcctcatcttccactcc
ttcggtggtggtaccggatccggattcacctccttgcttatggagcgtctctccgtcgat
tacggcaagaagtccaaacttgaattctccatttacccggctccgcagatctcaaccgct
gttgtcgaaccgtacaactccatcctgaccacccataccacgttggaacactccgactgt
gctttcatggttgacaacgaagctatctacgacatttgtcgccgtaatttggacatcgaa
cgaccttcgtacgtcaatctcaaccgtttgatggcgcaaatcgtgtcatccatcaccgct
tctctgcgattcgatggtgccctaaacgtcgatcttaccgaattccagaccaacttggtg
ccatacccacgtatccacttcccacttgccacctacgccccagtcatctcggctgagaag
gcttatcacgaacaactctcggttgccgaaatcaccaacgcttgcttcgagccagccaac
cagatggtgaaatgcgacccacgtcatggcaagtacatggcttgctgcatgttgtaccgt
ggtgacgttgtacccaaggacgtcaacgccgctattgcaaccatcaagaccaagcgcacc
atccagttcgtcgactggtgcccaactggtttcaaggtcggcatcaactatcagccacca
accgttgtccccggtggtgacctggccaaggtgcaacgtgctgtgtgcatgttgagcaac
accacagccattgctgaggcctgggcccgcttggatcacaaattcgacttgatgtacgcc
aaacgtgctttcgtccactggtacgtaggtgaaggtatggaggaaggtgaattctccgaa
gctcgcgaggacttggcagctcttgagaaggattacgaggaagtgggattggattcgatg
gagggggaagcggatgaagatgatgaagaagagtattga
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