Clavelina lepadiformis (light-bulb sea squirt): 143459351
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Entry
143459351 CDS
T11416
Name
(RefSeq) tRNA pseudouridine synthase Pus10-like
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clep03016
]
143459351
Enzymes [BR:
clep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
143459351
Transfer RNA biogenesis [BR:
clep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
143459351
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
PilZ
Motif
Other DBs
NCBI-GeneID:
143459351
NCBI-ProteinID:
XP_076812580
LinkDB
All DBs
Position
5:complement(19508232..19510855)
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AA seq
514 aa
AA seq
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MQFCFEMDQETWKKAFATFCPRCVVRLFCHDWKVLKMSEKDIVNFLAENNDEQIETSFLE
IEQRRSLQVTELQNGNGDEMNATTDFLCISCLGILMTPFLEDCSQKVAETVANDNYTFNR
FQCFYFLPHQLFVSDKVSQDTAKQLFGVNAVENEAHDVKEIFKILMEPLVTAKLKVPRSI
DANFEIAINISHREAEKKVLPVMKSKSPRSFTHGKGKHPAKRLKPLDGVSIAQVKHAISK
ISVEELREMSSSLSQPCKVEAIQLNHSSVYVGGRYNKYSRTLPQTPWIIDGKRKLENSVQ
EFLGGPIKDAFRADGYNFSSSGREDVDVRMLGTGRPYLIELINPRFPSVPQAKILEIEKK
INEQTSDISSSGLQIVSKTDCKRLKEGEEEKTKSYYALCRFIHPPRQTQLEKLGQLKDLT
DVEIKQTTPVRVLHRRPLAVRIRTIHKISLRGFDDNKQFFKLELSTQAGTYIKEFVHSDF
GRTSPSLRDFVDADVDIIELDVQSVDVVWPPGFK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttgttttgagatggatcaagaaacttggaaaaaagcatttgcgacgttttgc
ccaagatgtgttgtgcgattgttttgccatgattggaaagtgctgaaaatgtccgaaaaa
gacatagtaaattttttagcggagaataatgatgaacaaattgaaacatcgtttctcgaa
attgaacagcggcgaagtctacaggttactgaactacagaatggcaatggtgatgaaatg
aatgcaacaaccgattttctctgtatatcctgccttggcattctaatgacgccgttctta
gaagattgttcacaaaaggtggcagaaacggttgctaatgacaactacactttcaatcgc
tttcagtgtttttattttcttccacatcaactttttgtgtccgataaagtttcacaggac
actgctaagcaactgtttggtgtaaatgctgtggaaaatgaagctcatgatgtaaaagaa
atatttaagatcttgatggaaccccttgtgactgccaagcttaaagtaccacggagcatt
gatgccaattttgagatagctataaacatttcgcacagagaagctgagaagaaagtgctg
ccggtaatgaagtctaaatctccaagatcattcactcatggaaaaggaaagcatcctgca
aaacgtttgaagcctttagatggggtttcaattgcacaagtgaagcatgcgatatcaaag
atcagtgttgaagaactgcgtgaaatgtcatcttcactatcccaaccctgcaaagttgaa
gcaatacaacttaatcattcctctgtttatgtcggcggcaggtacaataaatacagcaga
acactgccgcaaacgccttggatcattgatggcaaaagaaaattagaaaattctgttcag
gaatttttaggtggacctattaaggatgcgttcagggctgatggttataatttttcctcg
tccggacgtgaagatgtggatgtgaggatgcttggaactggacgaccttacctcatagaa
ctgataaatcctaggtttccaagtgtgccccaggccaagatcctagaaattgaaaagaaa
attaatgagcaaacttcagacatctcatcaagtggactacagatcgtgagcaaaactgat
tgcaaaaggctaaaggaaggggaagaggaaaaaacaaagtcatattacgctctgtgccgc
tttattcatccaccaagacaaacacaactcgaaaaacttggtcagctcaaggacttgaca
gatgttgaaattaaacagacaactccggtccgagttcttcatcgccgtcctctggctgtg
aggataagaaccatccacaagataagtctgcgtggatttgatgacaataaacaatttttt
aaattggaactttcgacccaagctggaacatatattaaagaatttgtacacagcgatttt
ggtagaacatcaccgagtttaagagattttgttgatgctgatgttgacattattgaactc
gatgttcagtcagttgatgttgtttggccacctggtttcaaatga
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