Clavelina lepadiformis (light-bulb sea squirt): 143459587
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Entry
143459587 CDS
T11416
Name
(RefSeq) DNA-directed DNA/RNA polymerase mu-like
KO
K03513
DNA polymerase mu [EC:
2.7.7.7
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
143459587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clep03400
]
143459587
Enzymes [BR:
clep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
143459587
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
143459587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_lambd_f
DNA_pol_B_thumb
DNA_pol_B_palm
HHH_8
NTP_transf_2
Cdd1
HHH_5
TPR_ZFYVE26
Motif
Other DBs
NCBI-GeneID:
143459587
NCBI-ProteinID:
XP_076812921
LinkDB
All DBs
Position
1
Genome browser
AA seq
487 aa
AA seq
DB search
MEVLYFVERRLNQARIKHLTSLAGKFPEFRVTQNPQDATLWVAQESNCEEVIEFLVKKKK
VSGNTIAENKKLVDISWFIGCMKEKKLMDIQPSQLLKRKLDVDDGPSTKKSRDSGDEVGI
KTTVSMYACQRCTPLNHFNKKLTDALEILEEHALFRGDANAEARALAFRRGSATLKAHPK
EIVCEEDLKNLPYIGLNNSAKAGHCKMVAMEILSEGFSDEVEDVLNGSFYKSMKLFTGIF
GIGPQTARKWYHDLGMRTLEDVKGKNISLTYEQSLGMEHYDDLNTPIKLEEAECIIKMVE
KACNEVCDELTMTLVGGFRRGKSQGHDLDLFISHPEDGKEKGKLVLIIEKLKEHFIYTGR
KMDVGNNLNKGNFASSTMDNFEKCFSIFKFNKSWLNSNLEGKAEWKAVRLDLIVVPSHQF
AYALLGWTGTKHFEREIRRYARTEMKIVLTSHGMHSLDTKQNFPAETEEEIFQKLQLEYR
APSERCC
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaagttttgtattttgttgagaggcggcttaatcaagccagaattaaacatttaact
agtttagccggcaaatttcccgagtttagagttacccaaaacccacaggatgcaactttg
tgggttgcccaggaaagcaattgtgaagaggtgatcgaatttcttgtgaaaaagaagaaa
gtttccggaaatacgattgctgaaaacaaaaagcttgttgacatttcctggttcattggt
tgtatgaaggaaaaaaaacttatggatattcaacctagtcagcttctcaagcgcaaactt
gatgtagacgatggaccctcaacaaagaaatctcgagattcgggagacgaagtaggcatt
aaaacaaccgtgtctatgtacgcttgccagagatgtacacctctgaaccattttaacaaa
aagttaaccgatgctcttgaaatattagaagaacatgctttgtttcgaggcgatgcaaac
gcagaagctcgggcacttgccttccgtcgcggttcagcaactttaaaggctcatccaaaa
gaaattgtgtgtgaagaagatttgaaaaatctaccctacattggtttaaataattcagcg
aaggcaggccactgtaagatggttgcgatggagattttaagcgaaggtttttccgacgaa
gttgaagatgttttaaatggttcattttataaaagtatgaagttatttacaggaatattt
ggcattgggccacaaactgcacggaaatggtatcatgatttaggcatgagaacacttgag
gatgttaaaggcaaaaacatctctctaacttatgagcaaagcttgggaatggagcattac
gatgatctcaacacccccataaaacttgaagaagctgagtgtattataaaaatggtcgaa
aaagcttgtaatgaagtctgtgatgagttaaccatgactttagttggtgggtttcgaagg
gggaaatcccagggtcacgacctggacttgtttatttctcaccccgaagatggaaaggag
aaaggaaagttggtattaattattgagaaattaaaagaacatttcatatacactggtcgt
aaaatggatgtcggcaacaatctgaacaagggcaattttgcttcttcaacaatggacaac
tttgaaaaatgtttcagtattttcaagtttaacaaatcgtggttaaattcaaacttggaa
ggcaaagctgaatggaaagcggttagactcgatttgattgttgtcccttcacatcagttt
gcgtatgcactcttaggttggaccggtacgaaacatttcgaacgggaaatacgccgatat
gcgaggactgaaatgaagattgtgctaaccagtcacggaatgcattcactggacacaaag
caaaactttcctgcagaaaccgaggaagaaatatttcagaaattgcagttagaatataga
gcacccagtgaacgatgttgctaa
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