Clavelina lepadiformis (light-bulb sea squirt): 143459780
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Entry
143459780 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143459780 isoform X1
KO
K16547
protein NEDD1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clep03036
]
143459780
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clep04812
]
143459780
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
143459780
Microtubules and associated factors
gamma-tubulin ring complex
143459780
Cytoskeleton proteins [BR:
clep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
143459780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
143459780
NCBI-ProteinID:
XP_076813169
LinkDB
All DBs
Position
5:5482584..5488371
Genome browser
AA seq
704 aa
AA seq
DB search
MPEAGPFFASAGDDIKIWDSLSAEVVKQYNFHKGSVKDLSWSHDNAFLCSTSSSGDKILL
CDCQLLSKDKPKIVAEHASGEHQTCVKTSPGERKLYSGGVEGATMIWDRYSGKLKKFYKD
THSSPVTCIALNDSETHLASGSSKGDVVIRNLSSDVITKPTLNTNGSAVRAMTFSPWKNS
LLGMTLDDGSLNLWDALHGRSYHNFQEIHNAPAMALAFSTHNDLLLASVGLDKYLMIYDV
KSHKFLNKTLADHPLTSLAFMHNGVSLFAGSSMGKIYHFDLRSLSRPVKHFVAHSTSVHR
ITVQNLIKLKRERSRTVKTEDRVTDRRTAVMEGVTERNRNPKTIEKLEGGRSTTPSVTTS
MTNNSRHISSSASFSMPDSSKVTNGTHRLKDTKAKLKEEGSSSSLKFTKVLPSQVDDLGG
VLSPVREDVFENLSATSADANLSTFPLDPTLMGVTLSSSTDTIGSYCDDILSPVTNNARL
SKNRTPLGTQIHSRTSPHPLRESHNFVPGAGGDKADNLAPFHKGTGLDDGNGTCSSTTTP
LAGSNTSTPIERNAPPVIISGSQQKNKQTMVTQPLVQKSKSETDEPLPNETVSTVTSTIS
QAATSTSNLVTLAPTGVIKTSAGEVPVFQYQAEYLRNTVKEMVDDLGDQLRSQMNEHLAQ
MVKFFLRQEEVIQAQRCDVNQRLLQEVERLKEENERLRRRSRDV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagcaggtccattctttgcttcagctggcgatgacatcaaaatatgggattcg
ttgtctgctgaagttgtcaagcagtacaattttcataaaggaagtgtaaaagatttatcg
tggagccatgacaatgcttttttatgtagcacgtcttcatctggtgataagatactgctt
tgtgattgccagttgctttctaaagataaacccaagattgttgccgaacatgcctcaggg
gaacatcagacctgtgttaagacatcacctggcgagaggaagctctattctggtggggtt
gaaggggcaaccatgatttgggatagatatagcggaaaactgaagaaattttacaaggac
acgcattcaagccctgtcacttgtattgcactgaatgattctgaaacacatctcgcatct
ggcagtagcaagggtgatgttgtcataagaaacctgagcagtgatgtcataacaaaacca
accttgaacacaaatggttcggcagttcgagccatgactttttccccatggaagaactct
ctgttaggaatgacgttggatgatgggagccttaacctctgggatgctttgcacggcaga
tcttaccataacttccaagaaattcataatgcacctgcaatggcactggcattctccact
cataatgatctattactagcatcagtcggccttgacaaatatctcatgatttatgatgtg
aaaagtcataagtttttaaacaaaactctcgctgaccatccattgacctcgcttgcattc
atgcacaatggagtgtcgttatttgccggttcatcgatgggcaaaatataccatttcgat
cttcgctcattatccaggcctgtcaaacattttgttgctcactctacttctgtgcatcga
atcactgtgcaaaatctaatcaaattaaaaagagagcgttcaagaactgttaaaactgaa
gaccgagtgacagataggcgaacagctgtaatggaaggcgtaacagaaagaaatagaaat
cccaaaacaattgaaaaacttgaaggcggtagatcaaccacgccatctgtaacaacaagc
atgacaaataactcaaggcatatttcaagttcagcaagtttttcgatgcctgatagttca
aaagttacaaatggtacccatagactgaaagataccaaagctaaactgaaagaagaaggt
tcttcgtcttctttgaagttcacaaaggtcctgccctcccaagtggatgatctaggtgga
gtcctctctcctgttcgtgaagatgtgtttgaaaatttgtctgctacatccgctgatgca
aatttaagcactttcccactagatcctacactaatgggagtaactttatcctcgtcaact
gatacaattggctcctactgtgatgacattttatcaccggtgacgaacaacgcaagattg
agcaaaaatcgtactcccttaggaacacaaatccactcccggacttctccccatccactg
cgagaatcccacaatttcgttccgggtgctggaggagacaaagcggacaatttggcccct
tttcacaaaggtactggtctagatgatggaaatggtacctgcagtagcacaactacgccg
ttagctggttccaacacctccactcccatagagaggaacgcaccacctgttattattagc
ggctctcaacagaaaaacaagcagacaatggttacgcaacccttagtgcagaaatcaaag
tcagaaacagatgaaccgctacccaacgaaactgtatctactgtcacttcaaccatatca
caagctgcaaccagtacctccaatctagtaactcttgcccccaccggtgtcattaaaacc
tcggcaggtgaagttcctgttttccagtatcaggccgagtacttgagaaatacagtaaag
gagatggtggacgatttaggcgatcaactccgaagtcagatgaacgaacatctcgctcag
atggtcaagttcttccttcgtcaggaggaagtgatacaagcgcaaagatgcgacgtcaac
caacgactcctccaggaagtcgagaggttaaaagaagagaacgagaggcttcgtaggagg
tcacgtgacgtttaa
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