Clavelina lepadiformis (light-bulb sea squirt): 143459976
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Entry
143459976 CDS
T11416
Name
(RefSeq) pyruvate carboxylase, mitochondrial-like
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00020
Citrate cycle (TCA cycle)
clep00620
Pyruvate metabolism
clep01100
Metabolic pathways
clep01200
Carbon metabolism
clep01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
143459976
00620 Pyruvate metabolism
143459976
Enzymes [BR:
clep01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
143459976
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Dala_Dala_lig_C
BSH_CusB
ATP-grasp
BSH_RND
RimK
BSH_CzcB
ATP-grasp_3
NQRA_N
BSH_YknX
RnfC_N
Motif
Other DBs
NCBI-GeneID:
143459976
NCBI-ProteinID:
XP_076813420
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All DBs
Position
5:complement(4212599..4221614)
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AA seq
1205 aa
AA seq
DB search
MKMLTLKLNRTLSSAPRRHRLDKIINSLPCLSKTRRTYKTSFPVGVTYPKSSTVTSNIEP
IQKVLVANRGEIAIRVFRACTELGIRTVAIYSEQDAKHTHRQKADESYLIGQGLAPVNAY
LHIPEIIETAKEVGVDAIHPGYGFLSERADFAQACVDAGIRFIGPSPQVVQQMGDKVAAR
AIAIAAGVPVIPGTDGPVTTLDEAKDFAQKYGFPLIMKAAFGGGGRGMRFVNEMEELEDN
FHRAVSEAEKAFGNGAMFIERYLQGPRHIEVQILGDRAGNVVHLYERDCSIQRRYQKVVE
LAPASNLPIGLRRLLADDALKIARHVGYENAGTVEFLLDSQGRHYFIEVNSRLQVEHTIT
EQITGVDLVQSQIRLAEGYTLPDLGLNQENIQVNGCAIQCRITTEDPAHDFRPDTGRIEV
FRSGEGMGIRLDSASAFAGAIVSPHYDSLLVKVISHAADMPSAARKMHRALREFRIRGVK
TNIPFLLNVISDDAFLHGTITTQFIDNNPQLFKMHPSMNRAGRLMHYLAEVLVNGPSTPL
PTDQRPPYDEPVVPSLPAGSKPPPGWRQVLLERGPEEFARAIREHQGLLLTDTTMRDAHQ
SLLATRVRTYDLARIAPFVANRMNGLFSLENWGGATFDVALRFLHECPWERLRVLREKIP
NIPFQMLLRGANGVGYTNYPDNVVKKFCELAYINGMDIFRVFDSLNYLPNMKLGIEAVGE
AGGVIEAAISYTGDVSDPSRLTKYDLKYYLDLADELVAMGTHILCIKDMAGLLKPQAARI
LVSSLREKFPDIPIHVHTHDTSGAGVAAMLAATEAGADIVDGAIDSMSGMTSQPSIGALV
TSCERTALDTGLPMNQLALYNEYWEQTRQLYAPFECTISMKSGDSSVYQHEIPGGQYTNL
HFQAHSMGLGNQFSKVKLRYAEANKMFGDLIKVTPSSKVVGDMAQFMVQNNLSAEEVEER
ADELSFPQSVIDMMRGAIGYPPGGFPEPLRSKIIRDQPVFEGRPGEILEPLDFDKLKKEL
KEEHGSNVTEEDVMSAAMYPKVTSDFLRFYKDNGPVDKLDTPRFLCGPRIADEFKVTLEP
GKTLHIKPLAVGDLKSETGEREVFMELNGQLRSILVKDKEALKEMHFHPKARAGVKGSIG
SPMPGDVLEVKVEVGEKVVKGQPLLVISAMKMEMVVAATTDGVVKEVAVTKGMHVEGEDL
LVEVE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctcactctaaaacttaatcgaactctcagctctgcgccaagaaggcatcgt
ttggacaaaatcataaattctttgccttgcttatcaaaaacgagaagaacatacaaaact
tcatttccagttggtgttacttatccaaaaagttcaaccgttacatctaatattgaacca
atccaaaaggttttggttgcaaaccgtggagaaattgcaatccgtgtctttcgtgcttgc
acagagttgggaattcgaacagttgctatttattcagagcaagatgctaaacacacccat
cgccagaaggctgatgaatcatacctaattggacagggtttagctcctgttaatgcatac
ctacatattccagagatcatcgagactgctaaggaggttggtgttgacgccatccatcct
ggatatggattcttatctgaacgagcagattttgcacaagcctgtgttgatgcaggtatt
cggttcatcgggccttcaccccaggttgtacaacaaatgggtgacaaagttgccgctcgt
gcaatagctatagctgctggtgtgcctgtgattcctgggactgacggcccagtgacaaca
ttggatgaggcaaaagattttgctcagaaatacggctttccactcatcatgaaagcagct
tttggtggtggtggcagaggaatgcgatttgttaatgaaatggaggaattggaggacaac
tttcacagggctgtgtcggaagcagagaaagcttttggaaatggcgcaatgtttattgag
agatatctacaaggtccacggcacattgaagtacaaattttaggtgatcgcgctgggaat
gttgttcatctttacgaaagagattgctcaattcaacgaaggtaccagaaagttgttgaa
cttgccccggcctcgaatcttcccataggacttcgtcgattgcttgctgatgatgcgcta
aaaattgcgcggcatgttggctacgaaaatgctggaaccgttgagtttttgcttgatagt
cagggacgacattactttatcgaagttaactctcgtctgcaagttgagcacacaatcaca
gagcaaataacaggggttgatttggttcagtcccaaattcgtttagcagaaggatacacg
ttacctgaccttggtttgaatcaggagaatatccaggtcaatggttgcgccatccagtgc
agaataaccacagaagatccagcccacgatttcagacccgataccggaaggattgaggtc
tttagaagtggagaaggaatgggcatcagactggacagtgcatctgcatttgcaggagcc
atagtttctcctcattatgactccctccttgttaaggtgatatcacatgctgctgacatg
ccgtctgctgcgaggaaaatgcatcgcgctctgagggaattccgaataagaggagtaaag
acaaatattccatttctactgaacgtaataagtgatgacgctttcctccatggaacaatc
acgacacagtttatagataacaatcctcagctgttcaaaatgcatccaagcatgaataga
gccggccgtttgatgcattatctcgctgaagtcttggtaaatggcccatccacaccactc
ccaactgatcaaagaccaccatacgatgaaccggtcgttccatccttgccagcaggatcg
aaaccacctcctggatggcgacaggtacttcttgaaaggggtcccgaagaatttgcgaga
gcaattcgtgaacatcagggattgctactcaccgacaccaccatgagagacgcacatcaa
tctcttctcgccactagagtgcgcacatatgaccttgcaaggatagctccttttgtggct
aatcgtatgaatggattgttttctttggaaaactggggtggcgccacattcgacgtcgct
ttgagatttctccatgaatgtccatgggaaaggttacgtgtgctccgtgaaaaaattcca
aatattccatttcaaatgttgcttagaggtgcaaatggagtgggctacacaaattaccct
gacaatgttgtgaagaagttttgcgagcttgcctacataaatggaatggatatatttcgt
gtatttgactccttgaattacctcccaaacatgaagcttggtatcgaagcagtaggagaa
gcaggtggtgtgattgaagcagcaatatcctacactggtgatgtgtcagacccatcacgc
ttgactaaatatgacctgaaatattaccttgatctggccgacgaactcgtggccatgggg
acacatattctatgtattaaggatatggctgggttgctcaagccacaagccgcaagaata
cttgtttcatcattgagggaaaaatttccagacataccaatccacgttcacactcatgac
acatctggagctggtgttgctgcaatgttggctgcaactgaggcaggtgcagatatcgtg
gatggagctatcgattccatgtctggtatgacatcacagcctagcataggagctttagtg
acatcgtgtgaaagaacagcactcgatacaggtctgccaatgaaccaactggccctgtac
aatgaatactgggagcaaaccaggcaactctatgcgccattcgaatgcacaatttcaatg
aagtctggggattccagtgtttaccagcatgagatccctggtggccagtacaccaacctc
cacttccaagcacattccatgggtcttggaaaccagttctcaaaagtgaagctgagatat
gctgaagcaaataaaatgttcggtgatttaattaaggtgacaccatcatccaaagttgtt
ggagacatggctcagttcatggtgcagaataatctctctgcggaagaagtagaagaacga
gcagacgagctttccttcccacaatcagtcatagatatgatgcgtggggctattggttac
ccacctgggggatttccagagccccttagaagcaagataatccgtgaccagccagttttt
gaaggtaggccgggtgaaatcttggagcctcttgacttcgacaaattgaaaaaggagctg
aaagaagaacatggatcaaatgtcaccgaggaagatgttatgagtgcagccatgtacccc
aaggtaacatctgattttcttcgcttctacaaagacaacggccctgtcgataaactggac
acaccaagatttttatgcggacctcgcattgctgatgaattcaaagtgactcttgaacca
ggaaagacacttcacatcaagccgctcgctgtcggtgatttgaaatcggagaccggtgag
agggaagttttcatggaattaaacggacagcttcgttccatactggtcaaagacaaagaa
gcattaaaagaaatgcattttcaccccaaagcaagagctggggtgaaaggttcgattgga
tctccgatgcccggtgatgttttggaagttaaagttgaggtcggagagaaagtggtcaaa
ggtcaacctctgcttgtcatcagcgccatgaagatggagatggtcgtagcagcaactacc
gacggtgttgtaaaagaggtggcggttacgaaaggcatgcatgtagaaggggaggacttg
ttggtcgaagtagagtaa
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