Clavelina lepadiformis (light-bulb sea squirt): 143459983
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Entry
143459983 CDS
T11416
Name
(RefSeq) putative ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clep03036
]
143459983
Enzymes [BR:
clep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143459983
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Gene silencing
piRNA pathway
143459983
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
143459983
NCBI-ProteinID:
XP_076813427
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Position
5:complement(6837894..6849124)
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AA seq
673 aa
AA seq
DB search
MFDDDDWGSGATSTTSNVFSNQGERGFSSGGGKPNAGRGRGRFASSSSSSGFGATNGFGG
HSRFDNHNTIDNLSSKNGTGASNDDDAWAPKSGGFGISNGFSGSGGFDSNSGGFGDSKPR
GKGFGGNNFGEKGRFKGGEEGHMARECPNNKSDGGENNDRPPLYIPPPPPEDDDAIYGSM
QKGINFGKYDSIPVEVTGVNPPRCIDSFDAADLPQHIRSNVAKAKYEKPTPVQKYSIPII
TSGRDLMACAQTGSGKTAAFLLPVLASLIRNGLESSSFSEKQLPQAIVVGPTRELVYQIY
LEARKFARGSICRPVVAYGGTSVGYQLRELQRGCNVLIATPGRLMDFINKGKVGLDKVQY
LILDEADRMLDMGFETEIRKLADSPGMPLKTERHTLMFSATFPDEIQKLAHDFLREDFLF
LTVGRVGGACSDVTQTIIQVDQGDKRSKLLELVANVNETRSRTLVFVETKRSADFLACSL
SQDSYPTTSIHGDRLQREREEALRDFKAGTHPILIATSVAARGLDIPKVEHVVNYDLPQE
IDEYVHRIGRTGRCGNLGQATSFYDNSKDAQLARSLVKVLSEAMQEVPPWLEGCAESAVG
SSFGADRGEFGGRDARRGGRRAKQNQGFGGGNDDFGSRSTGDYDYNDGGGFDGRSAAQNN
GPSGFGDDEDDWD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgatgatgactggggctctggtgcgacctcaaccacctcaaatgttttctcc
aaccaaggggaaagaggtttttcttcaggtggtggaaaaccaaatgcaggacgtgggaga
ggccgatttgccagttcatcgtcttcatcagggtttggggccacgaatggatttgggggt
cattctaggtttgacaaccacaacacaattgacaacctttcatcaaaaaatggtactggt
gcatccaatgatgatgatgcttgggcaccaaaaagtggtggctttgggatctctaacggt
ttcagtggcagtggtggttttgattcgaattctggaggttttggagatagcaagcctcga
ggaaaaggttttggtggaaataatttcggtgagaaaggtcgctttaaaggcggcgaagaa
ggccatatggcccgtgaatgtccaaataacaaatcagatggtggtgagaacaacgatcgt
cctccgctctacattcctccccctccacctgaagatgatgatgcaatatatggtagcatg
cagaaaggcattaactttggcaagtacgattcgatacctgttgaagtaacaggagtaaat
cccccaagatgcatcgattcatttgatgctgctgatctaccacaacacattcggtccaat
gttgcaaaagcaaaatatgagaaacccactcctgttcagaaatacagcattccaattatt
actagtggaagagatttgatggcttgtgcccaaactggttctgggaagacggctgcattt
ctgcttcctgtcttggcaagtttgatccgaaatggcctggagtcctcttcgttttcagag
aaacaacttccacaagccattgtggttgggccaacaagagaactggtgtatcagatatat
cttgaagctcgtaaatttgcaagaggttcaatatgtcggccggtagttgcttatggagga
acaagcgttggttaccagttgagggaattgcaaagaggttgcaatgttctaattgctact
cctggtcgcctgatggatttcataaataagggaaaggttggcttggacaaagttcagtat
ttgattttggatgaagctgacagaatgcttgacatgggcttcgaaactgaaatccgaaaa
ttggctgattctcctggcatgcctttaaagacggaaagacacacgctcatgttcagcgct
acatttcctgatgaaattcaaaaacttgcccatgactttttgagagaagattttcttttt
cttacagttggtcgtgttggtggtgcatgctctgatgtcacacagaccataatacaggtt
gatcagggtgacaagagatcaaaactactggaactagttgcgaatgtaaatgagactcga
tccagaaccctggtcttcgtagaaacaaagcgcagtgctgactttctggcttgctctttg
tctcaggattcttaccctaccactagcattcatggtgatcggctgcagagggagcgcgag
gaagcactacgtgacttcaaagctggcactcaccctattctcattgcaacatccgtggca
gcaagaggactggatattcctaaggttgagcacgttgttaactacgacttaccgcaagaa
atagatgaatatgtgcatcgtattgggcggactggccgttgtggcaacttgggtcaagct
acttctttctatgacaacagcaaggatgcccagttagcgagatcacttgtaaaggttttg
tcagaggcaatgcaagaagtgccgccctggctcgagggctgtgcggaatcggcagttggc
tctagttttggtgcagatagaggtgaattcggtggacgtgatgctcgtcgcggaggacgc
cgagcaaaacaaaaccagggctttggtggcggcaatgatgacttcggctcacgatcaacg
ggtgactatgattacaacgatggcggcggctttgatggacgttcagcggcacaaaacaat
ggaccttctggatttggagacgatgaggatgactgggattaa
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