Clavelina lepadiformis (light-bulb sea squirt): 143460425
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Entry
143460425 CDS
T11416
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143460425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143460425
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143460425
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143460425
NCBI-ProteinID:
XP_076814043
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Position
1:complement(4341385..4344595)
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AA seq
530 aa
AA seq
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MSKGFSFGSTTGGSLFGNKQTTSSGFAFGSSSGTTQQSAFAFPTNTSSSGFGSGFGTKTT
SAGLFGSSGFGAKTTASSLFGSSGFGAKTTTSSLFGGTSSSGFGFPKSGTNQGALFAQQQ
QAAQQQQADVGASALLATATALSAPLVYGDERDAIITRWNQIQAFWGTGRGYYRKDGAHI
NFTPENHFSRFKAVGYSCLPTAKDEEGLVAMVIAKKESEMSSIGGSKVEEAIHKILGGSQ
ALKVNVQSMRSLPNDKTELTIYVSEQSSATGAVRRVPASELHRFMQQSNIQQQLKQQIFV
ESCLPRIAMTKQQIGNLLASPPAGVDPVIWEQAKRDNPDPKTLLPVPMTGFSELRNRLHL
QEMMAKQHQTRLDILSKGLHNTRQTQVELQSKIDQHKRKLCETSHRVLQVVISQEIQRKT
GFAIQPEEEEIRVRLEALHTEINAPSHFRGRLNELLSQTRLHHHTGGSPAMPGPNWLDGE
SLNDVNQHLRKQQEGLNTLVNILKEDFADLKLIEETLASDDALQHPTHYR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagggattttcttttggttccacaactggtggttctctttttggaaataaacag
accacatcatcaggctttgcatttggttcatcgagtggaaccactcagcaatcggctttt
gccttccccaccaatacaagctcatctggttttggctcaggttttgggacaaaaacgacc
tctgctggcctgtttggaagttcaggtttcggagcaaagacgacggcgtcgagcttattt
ggtagttcaggatttggagctaaaacaacaacatccagtttattcggcggaacatcgagc
tctggtttcggttttccaaaatctgggaccaatcagggggctttatttgctcaacaacaa
caagcggctcaacagcaacaagctgatgttggggcaagtgcactgctggcaactgctact
gctctctcagcccctctagtgtacggtgatgaaagggatgccatcatcactaggtggaat
cagatccaagctttctggggcacagggaggggatattacaggaaggacggggctcacatc
aacttcaccccagaaaaccacttcagcaggttcaaagccgttggatacagctgcttgccc
accgcaaaggatgaagagggcttggttgccatggtgattgcaaagaaggagtctgaaatg
agcagtatcggagggtcaaaggtcgaggaggcgatccacaagatcctgggggggagccag
gccctcaaggtcaacgtacaatccatgaggagtcttcctaatgacaaaactgaactcaca
atctacgtgagtgagcagtcaagcgcgacaggtgcggtgaggcgtgtccctgcctcggag
ttgcaccggttcatgcagcaaagcaacatccagcaacaactcaagcagcaaatatttgtt
gagtcatgcttgccgcgcattgcgatgacgaagcaacaaatcggcaacctcctcgccagc
ccacctgcaggggtcgatccagtgatatgggagcaagccaaacgtgacaaccccgacccg
aaaaccctcctccctgtccccatgaccggattctcggaactgcgcaatcgactccacctg
caggagatgatggccaagcagcatcagaccaggctggacatcctgagcaaagggctccac
aacacgaggcagacacaggtggagcttcagtcaaagatcgatcaacataaaaggaaactg
tgcgagacttctcatcgagttctgcaggttgtgatatcacaagagatccagcggaagacc
gggtttgccatccagcccgaagaagaagagatccgggtgaggttggaggcgctccacacc
gagataaatgctccctcccacttcaggggtcgcttaaacgagctcctgtcccaaactcgc
ttacatcatcatactgggggaagccccgctatgcctggaccgaactggctggacggggaa
tccctcaatgacgtcaatcagcacctcaggaagcagcaggaagggctgaacactctggtc
aacattttgaaggaggatttcgctgatttgaagctcattgaggagactcttgcatccgat
gacgccctgcagcatccaactcactacagatga
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