KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143460498
Entry
143460498         CDS       T11416                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:clep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:clep03016]
    143460498
Enzymes [BR:clep01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     143460498
Transfer RNA biogenesis [BR:clep03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    143460498
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf_CCCH_4 zf-CCCH Torus zf-CCCH_2
Other DBs
NCBI-GeneID: 143460498
NCBI-ProteinID: XP_076814134
LinkDB
Position
1:18917853..18922636
AA seq 609 aa
MSNYKSFIPESGDGNAYIKREFVLAKKGGNERKNVTGEILSVESENINATKLESKHTKAR
GQNKRRPRPQKEKLEEKLCPSKITDEGTCTFGDKCKYLHDISDYMKIKPSDLGEDCFSYR
KYGFCNYSYACRFAGDHVEYNPENGYSNVVDEDMKSTQYVPVKNVLSRDLQLSLRKRKVG
FNRTETALKGISLKQEKRRKCAKDESNDIDNDDQKTGTLSSVNVTHDTEPDNSVSTESNS
GCVLDSDVISLRPPEKKKIDFKNKLYLAPLTTCGNLPFRVTCKRLGADITCGEMAVATNL
LQANISEWALMKRHPSEDIFGVQLCGAFPDTMARCAELLNKTCDIDFIDINLGCPIDLIY
KKGAGSALMRRSKKLFDITTCMEAVLDIPLTCKLRTGIETGKNNAHSILPIIRDCNVALA
TVHGRSREARYTRVADWNYIDKCAQAADPMPVFGNGDVLSYHDYYSALDNTSVAGIMIAR
GALIKPWIFTEIKERRDWDISSSERLDLLKNFVNEGLMHWGSDTRGIATTRRFLLEWCSF
LHRYIPVGLLEHAPQRINERPPYYFGRDDLETLMASPNCNDWVKISEMLLGKVPENFEFL
PKHKANAYK
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgagtaattataaaagttttatacctgagagtggtgatggaaatgcttacatcaagaga
gagtttgttttagcaaagaaaggtggcaatgaaaggaaaaatgttacaggagaaattttg
tctgttgaaagtgaaaacatcaatgccactaaattggaaagcaaacatacaaaagctcgc
ggacaaaacaaacgcagacctcggccgcagaaagaaaagcttgaggaaaaactgtgtcca
agtaagattactgatgaaggaacgtgtacttttggtgacaaatgcaaatatcttcatgac
atatcagattacatgaaaatcaaaccttctgatcttggagaagactgtttttcatacaga
aagtatggattttgcaattatagctatgcttgtcgatttgctggtgaccatgttgaatac
aatcctgaaaacggatacagcaatgtagtggatgaagatatgaagtctacgcagtatgtt
cctgtaaagaatgtgctgtcaagggatttacaactaagcttacggaaacgcaaagttggt
ttcaaccggacagaaactgcattaaaaggcatttctcttaagcaagagaaaaggcggaag
tgtgccaaggatgaaagtaatgacatagacaacgatgaccaaaaaactgggactttgagt
tcagtaaatgtgacacatgatactgaacctgataatagcgtttcaacagaatcgaatagt
ggctgtgtccttgacagtgatgtcatttctttgagaccaccggaaaagaagaaaattgat
ttcaaaaataaattgtatttggcaccattaaccacttgtgggaatttaccgtttcgtgtc
acgtgcaaaagacttggagcagatataacatgtggtgaaatggctgtagccacaaatctt
ttgcaagcaaatatctcagaatgggcactgatgaagcgtcatccaagtgaagatatattt
ggtgtgcaattatgtggtgcttttccggacacaatggcaagatgtgcagaactactgaac
aaaacctgtgatattgacttcattgatattaacttgggctgtccaattgatttgatttat
aaaaagggtgcggggtcagccttaatgaggcgaagcaaaaaactgtttgatatcacaacc
tgcatggaggcggtacttgatattccattgacatgcaagttgcgcaccgggatagaaaca
gggaaaaataatgcacattctatcttgcctataattcgtgattgtaatgttgcattggca
acggtgcatggcagatctcgtgaagcaagatacactagggtagcagattggaattacatt
gataaatgtgcccaggctgctgaccccatgcctgtgtttggtaacggtgatgttctttct
taccacgattattattcagctcttgacaacacttctgttgcgggtattatgatagcaaga
ggcgcgcttataaagccatggatttttacggagataaaggaacgaagagattgggatata
tcaagttctgaaagacttgatttgcttaaaaactttgtgaatgagggccttatgcattgg
ggatcagacacaagaggcattgccactacgaggaggtttttgttagaatggtgctccttc
ttgcataggtacatacctgttggtttgttagaacatgcgccacaaagaatcaacgaacgg
cctccatattattttggtagagacgacctggaaacgctgatggctagtcctaattgcaac
gactgggttaagattagcgaaatgttactgggaaaagttccagaaaattttgaatttctt
cctaaacacaaggctaatgcgtataagtaa

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