Clavelina lepadiformis (light-bulb sea squirt): 143460564
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Entry
143460564 CDS
T11416
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00020
Citrate cycle (TCA cycle)
clep00640
Propanoate metabolism
clep01100
Metabolic pathways
clep01200
Carbon metabolism
Module
clep_M00009
Citrate cycle (TCA cycle, Krebs cycle)
clep_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
143460564
00640 Propanoate metabolism
143460564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143460564
Enzymes [BR:
clep01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
143460564
6.2.1.5 succinate---CoA ligase (ADP-forming)
143460564
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
143460564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Citrate_bind
GARS_A
B-block_TFIIIC
Motif
Other DBs
NCBI-GeneID:
143460564
NCBI-ProteinID:
XP_076814249
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All DBs
Position
5:complement(15574948..15578833)
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AA seq
434 aa
AA seq
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MALCVGHQLIRCGANHKLLSRLTKQASRISPITCKRWLNLQEYQSKKLMEDYSVNVQRFH
LVDSAPAAESAAQDLLNTNAKELVIKAMILAGGRGKGHFTSGLKGGVHLTKDPKKVLELC
KEMIGYNLITKQTPPAGVQVKNVMVAEALDIARETYFAILMDRAHNGPVMVGSPAGGMDI
EEVAEKTPHLIFKDAIDINKGIYDLQAAKMAENLGFVGEKAQKAAEQIKKLYELFIKVDA
TQVEINPFGETPDGDVVCFDAKVNFDDNAEFRQKDIFALEDKSESDPKEVDATNSGLSYI
SMDGNIACLVNGAGLAMATMDIIQHCGGSPANFLDLGGGVQEHQVYHAFKIVMSDEKVKA
ILVNIFGGIVDCKIIANGIVKAGRELNINVPLVVRLEGMNVNEAKRILEESKLPITSAED
FGDAAKKAVASVSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtgtgttgggcatcaactgataagatgtggtgcaaaccataaattactatcc
aggcttacaaaacaggcttccaggatcagtcctataacttgcaaaagatggttaaattta
caggaataccaaagcaaaaagttgatggaggattacagtgtgaatgtgcaaaggtttcat
ttggtagattcagcacctgcagctgaaagtgctgcacaagatttattgaataccaatgca
aaagaattagttattaaagccatgatattagctggaggacgaggtaagggtcacttcacc
agtgggttgaaaggtggagttcatttaacgaaagatccgaaaaaggtattggaactttgc
aaagagatgattggctacaacctgattacgaagcaaacaccacctgctggtgttcaagtg
aaaaatgtcatggtagcagaagccctggacattgccagggaaacttacttcgctattttg
atggatagagcacacaatggtcctgtcatggttggcagtcctgcaggaggcatggacatt
gaagaagttgctgaaaagacacctcatcttatatttaaggatgcaattgacatcaataaa
ggaatttacgatttgcaagctgcaaaaatggcagaaaacttggggtttgttggagaaaag
gcccagaaagcagcagaacagattaagaagttgtatgaattatttattaaagtagatgca
actcaagttgaaatcaatccatttggtgaaactccagacggcgatgttgtttgttttgat
gccaaagtaaattttgatgacaacgctgagttccggcagaaagatatcttcgcattagaa
gacaaaagtgaaagtgatcccaaagaagtagatgccactaacagtggtttaagttacatt
tctatggatggaaatatagcatgtttagtgaacggtgctggtttagcaatggcaaccatg
gacattattcaacactgtggtggatctcccgccaatttccttgatctcggaggtggagta
caggaacaccaggtctatcacgcgttcaaaatagttatgtctgatgaaaaggtgaaagca
attttagttaacatatttggtggtattgttgattgcaaaatcattgccaatggaattgta
aaagctggcagagaattaaatattaacgttcctttagtggtcaggttagaaggtatgaac
gtgaacgaggccaaaagaattttagaagaaagtaaacttcccataacgtcggcagaggac
tttggagatgcagccaaaaaagcagttgccagcgtttccagctga
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