KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143460697
Entry
143460697         CDS       T11416                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27-like
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143460697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clep03041]
    143460697
   03400 DNA repair and recombination proteins [BR:clep03400]
    143460697
Spliceosome [BR:clep03041]
 Complex B
  Other components
   Prp19 complex
    143460697
 Complex C
   Prp19-CDC5 complex
    143460697
DNA repair and recombination proteins [BR:clep03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    143460697
SSDB
Motif
Pfam: BCAS2 Spectrin_SYNE1 AlgP_helical Exonuc_VII_L
Other DBs
NCBI-GeneID: 143460697
NCBI-ProteinID: XP_076814417
LinkDB
Position
5:4713402..4714496
AA seq 204 aa
MAGEVVVDALPYFDKGYEESGVREAAIAMVEEETKRYRPTRNYLQYIPTIDTHAFETEIM
KNEFERLAARQPMELLSMRRYELPTPPSGQRNDITAWEECVKNSQAQLQHQQVRIENLDL
MMEHGCNAWRAYNDHLVLMLQDAQTKLQNVKKAIQDINWERKTKQIQAGERLRDLEARWV
NLVSKNYEIEEAILKLKLEISLNS
NT seq 615 nt   +upstreamnt  +downstreamnt
atggctggtgaagttgttgttgatgcactgccctactttgacaagggttatgaagaaagt
ggtgtccgtgaagctgcaattgctatggtggaagaagaaacaaaacgttaccggcccaca
cggaattatcttcagtacataccgaccattgacactcatgcatttgagacagagataatg
aaaaatgaatttgagcggttggcagcacgtcagccaatggaacttctgagtatgcgtcgg
tatgaacttcctacgccacccagtgggcagagaaatgatattacagcatgggaagagtgt
gtaaaaaattcccaagctcaattgcaacatcagcaagttcgaatcgaaaatcttgatctt
atgatggagcatggttgcaatgcctggcgagcgtacaatgatcatcttgtcttgatgcta
caagatgcccagacgaagcttcaaaacgtcaagaaagccattcaagacataaattgggaa
cgtaaaaccaaacaaatacaggcgggagaaaggttacgagatttagaggcaagatgggta
aacctggtcagcaaaaactatgaaattgaggaagctattttgaaactcaaactggaaatt
agtttaaatagctga

DBGET integrated database retrieval system