KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143460728
Entry
143460728         CDS       T11416                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03030  DNA replication
clep03410  Base excision repair
clep03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    143460728
   03410 Base excision repair
    143460728
   03420 Nucleotide excision repair
    143460728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clep03032]
    143460728
   03400 DNA repair and recombination proteins [BR:clep03400]
    143460728
Enzymes [BR:clep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     143460728
DNA replication proteins [BR:clep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    143460728
DNA repair and recombination proteins [BR:clep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      143460728
SSDB
Other DBs
NCBI-GeneID: 143460728
NCBI-ProteinID: XP_076814452
LinkDB
Position
5:complement(20676749..20697859)
AA seq 2268 aa
MVLQNSGKFTKSNAENYSEAAAKRLEAVQLSEALDEKYGYEKLRFPCEKLGWLINLCAAD
ILDEDKRLISAVDYYFLQDDGNRFKVSLPFRPYFYVAVEKNCEKEIMAFLQKKFSKIVSL
EILKKEDLDLHNHLVGLKRTYLKLSFYHVDDLVSVRQAINRSVRKNKEREKGNTTYTTML
TSALAGNAIDGKERSKSASAQDPMDKIIDIREYDVPYHVRVSIDLKIHVGLWYSVQYLGS
GHLPVITRRDDLLERPDPVVLAYDIETTKLPLKFPDSETDNIIMISYMIDGKGYLICNRE
IVSEDVEDFEFTPKPEYEGKFIVFNEPDELSTIHRFFDHILDVKPHIFVTYNGDFFDWPF
VEARAQKHGISMLSEIGFSKDSQGEYKSRQASHMDAYKWVKRDSYLPVGSQNLKAAAKAK
LRYDPVELDPEDICRLASEAPQTLANYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDS
VLRKGSGTLCEALLMVQAFHANIIFPNKQETVFNKLTNDGHVLDTETYVGGHVEALECGV
FRSNIPCSFRGEPAAYQNLHDEVERTIKFCVETEEKIPLNEVLNLDEVCSDIKSKLLALR
DKPARMEAPIIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGATCQRSMSWMW
RGEFLPASRSEFHRIQQQLENERFPNPDKSNEPLSFHELSKEEQANQEKKRLQEYCRRAY
KKTKVKRLEERYTTVCQRENSFYVDTVRMFRDRRYQFKAALKKAKRQVADAAASGDAAEI
KKAKGMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGAKIIQNARSIVE
KIGRPLELDTDGIWCVLPSSFPENYVIKSTNAKKPKVTISYPGAMLNVMVKDEFTNDQYE
ELVNSSSLTYSRRSENSIFFEVDGPYLAMVLPAAKEEGKSLKKRYAVFNFDGSLAELKGF
EVKRRGELQLIKIFQSSVFDAFLKGTTLEEVYQSVAKVADYWLDVLYSKAGNMPDSELFE
LISENRSMSRKLEDYGSQKSTSISTAKRLAEFLGDQMVKDAGLACRFIISKKPDGAPVTE
RAIPMAIFQSEHSIKRHYLRKWTKQQNMVDFDIRAILDWEYYIERLGSAIQKIITIPAAL
QGVSNPVPRVRHPDWLHKRLVEKNDVFKQKRITDMFQVAPQKRRQKSSEAEDEADTPVDD
IESIGENRLRKPNHVAITTAKRRKVVEEEDKELTQTWKEILGEAPPPDDLFKSTKEKRQE
WLAFHKRKWMIQRKQRKSRREGESASASGNAPMPRVQASTGLGGFLRQRAHAVYHSPWEV
VEVMRGDEPGQFKVFTLIGSELHVMKVNVPRIFYVNQRSTKESNNGDASWRKVHRILPRS
AQAINLYEYRIREQEYQKYLCNIRTELSNPDVLGVYETQFPLELRLLAELGSVWTVTRSA
SRILSGTDTDTFDIEHLQFRTLAEFSYLKPGSMREIFFYHHHYPGGKHIVGVFISASKKC
MVYVVDRVRVNRMTNLQSSYKSEREKCLSEEAVKDGDLPGDGYSFEVRLETDLKQMYRNL
QRHLTAYKDEKRGPTYVAYQSSVAVEKLRSNLPVANEFPIIPIHSKLSAGFTDEFSWQKD
AAMEMIQNFLNSKLTILHLLEQSRYFHLPVGNLTNDPGMFGADLFFTRHLQKHNQILWCS
QADRPDLGGREADDNRLGMDESENLSVELNNSGFYQSVCAQIDISSLAINTIVQSHHIND
MEGAASSGVSFDVIQQSSLEELVSGTHSAVSGLASYDDTALCSNTFRILKSMVQGWLRDV
SLYKNQLADDQLQNFYRWLGNRSSLFYDPALYRTLQVMTKKLFLQLIAEFKRLGSRIIQA
NFTRLIISTRKRNVADALAYVDYVSNSIIAKPIFHSVVLNVTQCWEHLLWIDSANYGGMK
SRSGEDENEENPSDESDDEENEKLQAAKDTDVVEMNFNLCRYLPTEAKIQASFEMVVAGY
ISMVYHESKRRRAETTPGQTPVVKKGSSQTQLNVSVSEMSEDERLKAAVPSDPTVSPYLV
TYSQDLVSGDLTEQMFSLSQKIMKLLPSDGAKLRELFPKLPGSHLELSNPTLEFVKSVCR
VLSVDEHVTSQIEKMRRNLLRLIGVGEFAPSADWSDPSASYVLGQVSCDTCSQSADLDLC
RDCVIGETGCTWICSGCDAPYDVSWIERRLVDDLQRKVMTFNLQDLTCMKCNSVKQGNLT
KQCECAGQFKLTVPASTLQDRVGILRNIAQHADMHYLMDIIQWLTSAF
NT seq 6807 nt   +upstreamnt  +downstreamnt
atggttttgcaaaactctggaaagtttacgaaatccaatgcagaaaattattctgaggca
gctgccaagcgcttagaggctgttcagctatctgaagccttagatgaaaagtacgggtat
gaaaagctgcgatttccatgtgagaaactaggctggctgatcaacctgtgtgctgccgac
atcttagatgaagataagcgtctgatcagtgctgttgattattattttcttcaagatgat
ggcaacagatttaaggtttctttaccttttcgaccatatttttacgtggctgtggaaaaa
aattgcgaaaaggaaattatggcatttttgcagaaaaagttttcaaaaatcgtgtcactt
gaaattcttaaaaaggaggacctggaccttcacaatcacctggttggtctaaaacgaact
tatttaaaattatccttctaccacgtcgatgatttagtgagcgtcagacaagctataaat
cgatcagttcgtaagaataaggagagagagaaggggaacacgacgtacaccaccatgttg
acgagtgctttggccggcaatgctatcgatggcaaagagcgtagcaagagtgcaagtgct
caagacccgatggacaaaatcatcgacatcagagaatatgacgtaccatatcacgtccgg
gtgtcgattgatcttaagattcacgtcgggttgtggtattcggtgcagtatctaggtagc
ggccatcttcctgtgataacccggagagatgatctactggagagaccggatcctgtggtt
ctggcctacgacatcgaaacaaccaaactgccactaaaatttcctgattctgaaaccgat
aacattataatgatatcgtatatgattgacgggaagggataccttatttgcaatcgagaa
attgtttccgaagatgttgaagattttgaattcactccaaagccggaatatgagggaaaa
tttatcgttttcaacgagccagacgagctcagcacaattcatagattttttgaccacatt
ttggatgtcaaaccacacatatttgtgacttacaacggtgatttctttgattggcctttt
gtggaggcccgtgctcagaagcacggcatcagcatgttgagtgaaattgggttcagcaaa
gattcccagggggaatataagagtcgtcaggcatcacacatggatgcatataaatgggta
aagcgtgactcttacttgcctgtcggaagccaaaacttgaaggctgcagcaaaagcaaaa
cttcgatatgatccagttgagttggatcctgaagacatttgccgacttgccagtgaagcg
ccacagacattggcaaattactcagtgtcagatgcggtggcaacgtactacatgtacatg
aagtacgtccatccattcatcttcgcactttgcaccatcatcccgatggaaccggacagt
gtgttaagaaaagggtcaggtacgttgtgtgaagcgttgctgatggtgcaagcattccac
gccaacatcatttttccgaataagcaggagactgtgttcaacaaacttaccaacgacggc
catgtattggacactgaaacttacgttggtggccacgtagaagcgcttgagtgcggagtt
tttcgttcaaatataccgtgtagttttcgtggtgaaccagctgcatatcaaaatcttcac
gatgaggttgaaaggacgataaagttttgtgttgaaactgaagaaaaaattccactcaat
gaagttttaaatttagacgaggtctgcagcgacataaagtcgaaattgcttgcgcttcga
gacaaaccagcaagaatggaagccccaataatctaccatttggatgtcggcgccatgtac
ccgaacattattttaaccaatcgcttgcagccttctgccatggttgatgaagccacttgc
gctgcgtgtgattttaataagccaggtgccacgtgtcaaaggtcaatgtcatggatgtgg
cgaggagagttcttgccggcgtctcggagtgaatttcatcgaattcaacagcagctggaa
aacgaaagatttccgaacccggataaatcaaatgaaccgctttcttttcacgaactgtcg
aaagaagaacaagccaatcaggaaaagaaacgactccaggaatattgtcgaagagcttac
aagaagaccaaggtaaaacggttagaagaaaggtatacgacagtgtgccaacgggagaac
tcgttttacgttgataccgtgagaatgtttagagacagaaggtaccaattcaaggccgca
ctcaagaaagcaaagcggcaagtggcagatgccgcggcatcaggtgatgcagccgagatc
aagaaagcaaaagggatggaagtcctgtacgactccttgcagctcgctcacaaatgcatc
ctcaactccttctatggatatgtgatgagaaaaggggctcgatggtactctatggagatg
gctgggattgtttgctacactggtgcaaaaatcatccaaaatgctagatctattgttgag
aaaatagggcgtccactggagttagacaccgatggtatctggtgtgttcttccgtcaagt
tttcctgagaattatgtcatcaaaagtacaaatgcaaaaaagccaaaagtgaccatttct
taccctggtgcaatgctcaatgtcatggtcaaggatgaatttacaaacgaccaatacgag
gaactagtcaactcctcgtcactgacctattctcgacggagcgagaattcgatatttttt
gaggtcgatggaccctacttggccatggtgctccctgccgccaaggaagaaggaaagagt
ttgaagaagagatatgctgtcttcaacttcgatggctcactcgctgaacttaagggattt
gaggtgaaacgtcgaggtgagttgcagttgatcaaaatctttcaatcttccgtctttgat
gcattcctcaagggaaccactctagaggaagtttatcagagtgtggcaaaagtggcagat
tattggcttgatgtcctatacagcaaggctggaaatatgccagactccgaactattcgag
ttgatttccgagaatcgatccatgtcgaggaaactggaagattatgggagtcaaaaatcg
acgtcaatcagcacagcaaagagattagcggaatttctgggagaccagatggtgaaagac
gcaggacttgcttgtcgcttcatcatctccaagaaaccggatggtgctcccgtgacagag
agagcgatccccatggcaatatttcagtccgagcacagcatcaaacgtcactacctccgc
aagtggacgaagcaacaaaacatggtcgactttgacattcgagccatacttgattgggaa
tattacattgaacgccttggaagtgccatccagaaaatcatcacaatacctgccgctctc
cagggagtctccaaccctgttcctcgggtgagacatcctgactggcttcacaagagatta
gttgagaagaatgatgtcttcaaacagaagcgcatcactgacatgtttcaagttgctcct
cagaagagacggcagaagagcagcgaagcagaagatgaagcagacactccagttgatgac
atcgaaagcattggagaaaatcgcctccggaagccaaatcatgttgccataacaacagct
aaaaggaggaaggttgtagaagaggaggacaaggagctcacacaaacgtggaaggagata
ctcggagaagcccctcctccagatgaccttttcaagagcacgaaggagaagcggcaagag
tggctggccttccacaagaggaagtggatgattcagaggaaacaaagaaagtcgcgcaga
gaaggagagtcagcgtcagcctctggcaatgctccaatgccgagagttcaagcatcgaca
ggtttgggcgggtttttgaggcagagagctcatgcagtttaccattcgccgtgggaggtg
gtagaagtcatgagaggagacgaacccggccaattcaaagtcttcacgctgattggctca
gagttgcatgtgatgaaagttaatgttccacgaatattttatgtgaaccaacgctccacc
aaggaaagcaacaatggtgatgcgtcgtggaggaaggttcataggatactgccaagatca
gcgcaagccattaatttgtacgagtatcggattcgtgagcaagagtaccagaagtacttg
tgcaacattcgaacagaactttccaatcctgacgtactcggtgtttacgaaactcaattt
ccacttgagcttcgattactcgctgagcttggaagtgtgtggaccgtaacgagaagtgcc
tctcgcatcttatcagggacagacacggacacgtttgacatcgagcatcttcagtttcga
actcttgccgagttctcttacctcaagccgggatcgatgagagaaatattcttctaccat
catcattatccaggcggtaagcacattgtcggagtctttatatcagcatcgaagaaatgc
atggtttatgttgtagaccgcgtcagggtgaacagaatgaccaacctacagagctcatac
aaaagcgaacgggagaagtgtttaagtgaagaagctgtgaaagatggcgacctgccaggt
gatgggtactcgtttgaagttcgccttgaaaccgatctcaagcaaatgtacaggaacctt
cagcgccatctcacggcttacaaagacgagaaaagggggccgacatacgtcgcgtatcag
tcgtcagtagccgtcgaaaaactacggtcaaatttgccggtcgccaacgagttcccgatt
ataccgatacacagcaagctctccgcgggtttcacagacgagttcagctggcagaaagat
gcggcgatggagatgatccaaaacttcctcaattccaaactcacgatcttgcacttactt
gagcaaagtcgctacttccatttaccggttggaaacctcacgaatgacccgggtatgttc
ggagctgacctcttctttacaagacatcttcaaaaacacaatcaaattctttggtgctcg
caagcagacagacccgatctcggcggaagggaagctgacgacaacagactaggtatggac
gagtcggagaatctatcggtcgaacttaacaacagtggattctaccaaagtgtgtgcgct
caaatcgacatttcatcgctcgctattaacaccattgtccaatcacatcacataaacgac
atggaaggcgccgcgagcagtggtgtcagctttgacgtcatacagcaatcgtcactagag
gagctagtgagcggcacacactctgcagtgagcgggttggcgagttatgacgacaccgca
ctttgctcgaacacattcaggattcttaagtctatggtgcagggctggcttcgtgatgtg
tctttgtacaagaatcagctcgctgacgaccaactacagaacttctatcgttggcttggc
aaccgatcttcgctcttctatgaccctgctctctaccgcactctacaggtcatgacgaag
aaacttttcttacagttaatagcagagtttaagcggctcggatcaagaataatacaggcg
aatttcacacgcctcatcatttccacccggaagagaaacgtcgcagacgcactcgcttac
gtcgactacgtcagcaattcgattattgcaaaaccgatttttcattctgtcgttctcaac
gtcacacaatgctgggagcatcttctctggatagactcggccaattacggaggaatgaaa
tcacgctccggggaagatgagaacgaggagaacccgtcagatgaatccgacgatgaggaa
aatgagaaacttcaagctgcgaaggatacggacgtggtcgaaatgaactttaatttgtgc
agatatttgccgaccgaggccaagatacaagcgagcttcgagatggtggtagccggctac
atatctatggtctaccacgaatcgaagcgacggcgcgcggaaaccaccccaggacaaacc
ccggttgtgaaaaaggggagttcccaaacccagttaaacgtttccgtttccgaaatgagc
gaggatgaaaggttaaaggccgccgtgcccagtgacccgaccgtgagcccgtatttagtg
acgtattctcaagatcttgtcagcggagatttgaccgaacagatgttcagcctctcacag
aagatcatgaaactgcttccaagcgatggggcaaagttacgcgaattatttccgaagctg
ccgggttcccatcttgaattaagcaatccaactctggaatttgtcaagtctgtatgtaga
gtcctgtccgttgatgaacacgtcactagtcagatcgagaaaatgcgtcgaaaccttctc
cggttgatcggggttggtgaatttgccccctccgcggattggagtgaccccagcgcctcc
tacgttctaggtcaggtgtcatgtgacacttgcagtcaatcagctgatttggatctgtgc
cgagactgcgtcatcggcgaaactgggtgcacttggatatgttccggatgtgacgcacct
tacgacgtaagctggatcgaaagacgtctcgtcgatgaccttcagagaaaggtcatgacc
tttaacctgcaggatctcacctgcatgaagtgcaattcagtaaaacaaggcaatcttacg
aaacaatgcgaatgtgccggtcaatttaaactcacggtgccggcttcaacgctccaagac
agagttggaattctaaggaacatcgcgcaacacgctgatatgcattacttgatggacatc
atacaatggctgacttctgcattctga

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