Clavelina lepadiformis (light-bulb sea squirt): 143460853
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Entry
143460853 CDS
T11416
Name
(RefSeq) vesicular integral-membrane protein VIP36-like
KO
K10082
lectin, mannose-binding 2
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
143460853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143460853
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
clep04091
]
143460853
Membrane trafficking [BR:
clep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
143460853
Lectins [BR:
clep04091
]
L-type lectins
143460853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
Motif
Other DBs
NCBI-GeneID:
143460853
NCBI-ProteinID:
XP_076814623
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All DBs
Position
5:complement(1871303..1874455)
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AA seq
332 aa
AA seq
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MGKAAYYFVISVLARAIFCQESSQVPPEGGFLKREYSLSKPYSGNGMTIPFWDFRDNAMI
TNNFISLTTNHQGQLGSVWSKIPCHLRDWEIHMQFKIFGGGRTLAADGLAIWYTYSRLTP
GPVFGSRDEFEGLGIFLDTYKNGDQPVTFPQISAMVGNGSTKYDHMSDGQLNSIGSCLGS
FRNKDYDTTIAIRYVRQRLTIKVDIDGQDTWRECIDVPGVQLPTGYFFGVSAATGDLADN
HHLIGFKFYELDITRTAEEEAEDWSTIKPGVFGKPPIDNRDDSGTGDYRNTSISGFKLFL
IIVCALLGVGVCIVVGVVVFQKRQEKNRKRFY
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagcagcatattactttgtgatttctgttcttgcaagagcgattttttgtcaa
gaaagctcacaagtgccccctgaaggaggatttttgaagcgagaatacagtctgagcaag
ccgtattcagggaatggaatgacaatcccattttgggattttcgcgacaacgctatgatt
acaaacaactttattagtttaactaccaatcatcaaggtcagctgggttcggtatggagc
aaaattccttgccatttgagggattgggaaattcatatgcaattcaaaatttttggtggc
ggccgcactctagctgcggatggcttagcaatttggtacacgtattctcggctgacacca
ggaccagtgtttgggagccgcgatgaatttgaaggtctcggaatattcttggacacttac
aaaaatggagaccaacccgtaacatttccacaaatctctgccatggttggtaatgggtca
acgaagtacgaccatatgagtgatggacaactaaactctattggctcgtgtttgggttct
tttcgaaataaggattatgatacaacaattgccattcgatatgtgagacaaagactaaca
ataaaagtggatatagatggacaagacacttggagagaatgcatagacgtaccaggggtg
cagctgccgactggatatttttttggcgtatctgccgctacaggggatttagcagataat
catcatttgattgggttcaaattctatgagttggatattacaaggaccgcagaggaagag
gctgaagattggtcgacgatcaaaccgggtgtcttcggaaagccgccaatagacaatcgt
gatgattccggtacaggggattaccgcaacacatccatctctgggtttaaactctttctt
ataattgtttgcgcattactcggcgtcggtgtctgcatcgttgttggggtcgttgtgttt
caaaagcgccaagaaaaaaaccgaaaacgcttctactga
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