Clavelina lepadiformis (light-bulb sea squirt): 143461252
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Entry
143461252 CDS
T11416
Name
(RefSeq) nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143461252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143461252
03036 Chromosome and associated proteins [BR:
clep03036
]
143461252
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143461252
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
143461252
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
CowN
Motif
Other DBs
NCBI-GeneID:
143461252
NCBI-ProteinID:
XP_076815213
LinkDB
All DBs
Position
5
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AA seq
915 aa
AA seq
DB search
MDMSSIVPSPATARDGRSKSKRAGKILQTMKMLDEAVTPKNDAMMSAIGSMPNQIVSTPA
NHLNVYDHSLFGSHLSTGQNLSMISEPNNTLLMEPTINLLELSTPTQMSMTDTTANFNYA
MLENPGLEATASIFMDFKKCLSQHGMSCDIYDLISSYEEICDDYEQLLKKIMTQVTPENS
AIVERLGKYLKEEKHTWRLVHSLFRDKFSNCSEEAMAVNDALVFYTSEKNIIDDYFDNDS
DIRQAQIVIDWLERNAADELTNIADQLQHYTGCVTWENTLHHLKARKSRGTTTADGMILE
MDPDAPTRTRKPLADLDREDESRLLKCVFSFIRGGRINEAEDLCVSHGQPWRAATLEGWK
LHHDPNTVNTSEDGGLSTIEGNPSRDMWKAACWALSNNDLYDVKERAMYGALCGNLKAML
EVGGSWEDYVWSYYKTMVDVATEKRIQQSANIRRPWQHIHSMLLPDEYFLQKCELDDVRT
VFEKIGHSPDKSIAEEAKNPNHFIQRCIILNDMDGLLDEILLWIDEESIHPQLLRFAAHL
LLILQSFGMTLNYEKCAQILEAYVKQLISDGRAGHLVAAYTACLPSDRQLDCYATFLETI
EDGDLRKEYLELASEAGLDVTAITKNVVERIRAQGVPDTAPLQVSQGDDLTLEPPLTPGD
HKKIDAIEWLVFDPAQRSEALKQSNAVIRGFLAARKFSAARQVFQKIPRDSVEIIHREWH
AVADKDVPLPAGTDNAIREHICVQAYLSAQSTFSDWFKHFHNKPHEYEPANQASTFASVS
LSDLVAEEHRQKKQEEELGRWREVLEGLCFAALDKIYNVLLFPEGGWLVDVREDTEDNEE
NRCRHHQMSLLRRLYVPSLCDLLLNVLLNTGGRNDQCSKLADVIADEDNKLYELFTKQEG
KRILERIQDAMVDIL
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggacatgagtagcattgttccttctccagccaccgctcgtgatggtcgatccaagtca
aaacgggctggcaaaattttacaaacgatgaaaatgcttgatgaagcagtcactcccaaa
aatgacgccatgatgtctgcaattggttccatgcccaatcaaattgtttcaacaccggcc
aatcatctgaacgtttatgatcatagtttatttggttctcacttgtcaactggacaaaac
ctgtcaatgatttcagagcccaacaataccttgctcatggaaccaaccatcaacttgcta
gaacttagcactcccactcaaatgtctatgacagacaccactgccaatttcaactacgca
atgttggaaaaccctggcttggaagctactgctagtatattcatggattttaaaaaatgc
ctgtctcagcatggtatgtcctgtgatatttacgatcttatttcatcctacgaagaaatt
tgtgatgactatgagcaattgctcaagaaaataatgacacaagtcacccccgaaaacagt
gctatagtggagagattggggaagtacctaaaagaagaaaagcacacctggagattagtg
cattcgttatttagggataagttttctaactgttccgaagaagcaatggcagtcaatgat
gctctggttttttacacaagtgaaaagaatatcatagatgactactttgacaatgattca
gacatcagacaagcacagattgttattgactggcttgaacgcaatgctgcagatgaattg
accaacatagccgatcaactgcagcattacacgggctgtgtgacatgggaaaacacactt
catcacttaaaagctcgcaagagcagagggaccacaactgctgatgggatgattttggaa
atggatcctgatgcaccaacgagaacacgaaaacctttggcagatcttgatcgggaagat
gaatcacgattgctcaaatgtgtcttctcatttatacgtggtggcaggataaatgaggcg
gaggatctatgtgtatcccatggtcaaccctggcgagctgccactttagaaggatggaag
ttacaccatgaccctaacactgttaataccagtgaagacggcgggctgtccaccatagaa
ggcaaccccagcagggacatgtggaaggccgcatgctgggctttgtcaaataacgacctt
tatgacgtaaaagaaagggctatgtacggggcgttatgcggtaacttgaaggcgatgctt
gaagttggtggttcatgggaggattacgtctggtcttattacaaaactatggtggacgtc
gcaaccgagaaacgcatccagcagtccgctaatataagacgaccgtggcagcacattcat
tccatgttgcttcctgacgaatattttctgcagaaatgcgagttggacgatgttaggaca
gtttttgaaaagatcggtcactcgccagacaagtcaatagccgaagaagcaaagaacccg
aatcatttcattcaaagatgcatcatcctcaacgacatggatggtttgctggatgaaatt
ctcctctggatcgatgaggaatcgatccatcctcaacttcttagatttgcggcccatctc
ttgttgatcttgcaatcgttcggaatgacactaaattatgaaaagtgtgcccagatatta
gaagcctatgtcaagcagctcatatctgatggccgcgcaggccacctagtggcggcctat
actgcctgccttccctctgatagacagttggattgttacgccaccttccttgaaactata
gaagatggggatttaagaaaagaatatttagaacttgcctccgaagccggtcttgatgtc
accgcgatcacaaagaacgtagttgagagaatccgggcacaaggcgtcccagatactgcc
ccactgcaagtatcacagggtgatgacctgaccttggaaccgcccttgacccctggtgac
cacaaaaagattgacgcgatcgagtggctcgtgtttgacccggcacagaggtcagaggca
ctcaagcagagcaatgctgttataagaggatttttagctgcgcgaaaattttctgctgct
cggcaggttttccagaagattccacgagactcggtcgaaatcattcatagagagtggcac
gctgtggccgacaaagatgttccactaccagcaggcacagacaacgcgatcagggaacac
atttgtgttcaggcttatttaagtgctcaaagtacgttctctgattggttcaaacatttc
cacaacaaaccgcacgaatacgaaccagccaatcaagcttccacatttgcaagcgtcagc
ttgtcagatctcgttgctgaagaacacaggcagaagaaacaggaagaggaattaggaaga
tggcgtgaggtcctggagggattgtgtttcgctgcccttgataagatctataatgtgctc
ttgtttccagaaggaggatggttggtggatgtgagagaagacactgaggacaacgaggaa
aatcggtgtcgccatcaccagatgtcactattgcgtcgtttatacgtaccctcattatgt
gatctccttctgaatgtacttctcaacactggaggtcgcaatgaccaatgctcaaaattg
gctgatgttatcgcagatgaagataataaactttatgagctgtttacaaagcaagaagga
aagagaattttagaaagaattcaagatgccatggtggatattttatga
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