Clavelina lepadiformis (light-bulb sea squirt): 143461617
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Entry
143461617 CDS
T11416
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03020
RNA polymerase
clep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
143461617
09124 Replication and repair
03420 Nucleotide excision repair
143461617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clep03021
]
143461617
03019 Messenger RNA biogenesis [BR:
clep03019
]
143461617
03400 DNA repair and recombination proteins [BR:
clep03400
]
143461617
Transcription machinery [BR:
clep03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
143461617
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143461617
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
143461617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143461617
NCBI-ProteinID:
XP_076815509
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Position
6:complement(557514..558318)
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AA seq
172 aa
AA seq
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MFYHISLEHEILLHPRYFGPSLLETVKQKLFTEVEGTCTGKHGFVIAVTTIDNIGDGLIQ
PGRGFVLYPIKYKAIVFRPCKGEVCDAVVTQVNKVGLFTEIGPMSCFISRHSIPGDMKFD
PESNPPCYKTDDEDVVIQQDDEIRIKIVGTRVDANDIFAIGSLMDDYLGLIS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcacatttctcttgagcatgaaattttgctgcatccccgatactttggtcca
agtctgctggaaactgtgaaacaaaaattgttcactgaagtggaagggacgtgcactggc
aagcacggctttgtaatcgctgtcactaccatcgacaacatcggagatggacttattcag
cccggtagaggatttgtgttgtatccaatcaaatacaaggcgatcgtgttccggccatgc
aagggggaggtgtgtgatgctgttgtgacccaggtcaataaagttggtttgttcactgag
ataggtccaatgtcatgcttcatatcaagacactcaatccccggtgatatgaagtttgat
cccgaatcgaatcctccttgttacaagactgatgatgaagatgttgtgatacaacaagat
gatgaaatccgaatcaaaattgttggaaccagagtggacgcgaatgatatttttgccatt
ggctctttgatggatgattatcttggcttaataagttaa
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