Clavelina lepadiformis (light-bulb sea squirt): 143461827
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Entry
143461827 CDS
T11416
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03030
DNA replication
clep03410
Base excision repair
clep03420
Nucleotide excision repair
clep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143461827
03410 Base excision repair
143461827
03420 Nucleotide excision repair
143461827
03430 Mismatch repair
143461827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clep03032
]
143461827
03036 Chromosome and associated proteins [BR:
clep03036
]
143461827
03400 DNA repair and recombination proteins [BR:
clep03400
]
143461827
DNA replication proteins [BR:
clep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
143461827
DNA Replication Termination Factors
ELG1-RFC complex
143461827
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
143461827
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
143461827
Check point factors
HRAD17(Rad24)-RFC complex
143461827
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_lid_RFC1
RCF1-5-like_lid
AAA_assoc_2
AAA_11
AAA_24
AAA_14
DNAX_ATPase_lid
RuvB_N
ResIII
AAA_16
DUF815
DEAD
AAA_5
nSTAND_NTPase5
AAA_7
PhoH
ATPase_2
AAA_19
Mg_chelatase
AAA_30
TniB
Thioredoxin_6
AAA_2
AAA_3
TIP49
nSTAND3
AAA_28
Gp44_lid
ABC_tran
Motif
Other DBs
NCBI-GeneID:
143461827
NCBI-ProteinID:
XP_076815832
LinkDB
All DBs
Position
6:complement(3234689..3236623)
Genome browser
AA seq
330 aa
AA seq
DB search
MAKTENHVNLPWVEKYRPKRLEELISHEDILKTIRRFMDEDRLPHLLFYGPPGTGKTSTI
LACARQLYSPKEFNSMVLELNASDDRGISVVRNEILSFASTRTIFNKGFKLIILDEADAM
TKDAQNALRRVMEKFTENTRFCLICNYLSKIIPAIQSRCTRFRFGPLNPDQMKPRLEFVI
KEEEINVEESGMKALVTLATGDMRKALNILQSTSMAHDKVTEDTVYTCTGHPKRNDIEDI
LEWILNKDFTTAYRNVMRLKTEKGMALQDILEEIHTYVHKIDFPTEIRIHLLDKMAEIED
RLAAGTNERLQTGSLVSAFQQAKNMVPAHV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacggaaaatcatgtaaatttaccatgggtggagaaataccgcccaaaacgt
cttgaagaattaatttcacacgaggatattttaaaaacgatccgccgttttatggatgag
gacaggttacctcacttgctcttttatggaccacctggaaccggaaaaacatcaacaata
ttggcatgtgctcgtcagttgtactcaccaaaagaatttaattccatggtactggaacta
aatgcttctgacgatcgtggaattagcgttgtacggaatgagatcctcagttttgcaagc
acacgcacaatattcaacaagggttttaaacttattattttggatgaagcagacgccatg
accaaggatgctcaaaatgcactgcggcgtgtcatggaaaaatttacagaaaatacccga
ttttgtttgatttgtaactacttgtcgaagattattccagcaatccagtctcgttgcaca
cgttttcgatttggtcctttaaacccagaccaaatgaaaccacggctagagtttgttatt
aaagaggaagagattaatgtagaagaaagcggaatgaaagctcttgttactctggcaact
ggtgatatgagaaaagcactgaacatacttcagagtacatcaatggcccatgacaaagtg
accgaagacaccgtctatacatgtacaggtcatccaaagaggaacgatattgaggatatt
ttggagtggattttaaataaagacttcacgactgcgtatcgcaatgttatgcgattaaag
acggagaagggtatggccctgcaggatatcttagaagagatccatacttacgtccacaag
attgactttccaactgaaatacgaatacatctcttggacaaaatggctgaaatcgaagac
agacttgcggcaggcactaatgaacgtttacagactggttcacttgtgtctgcttttcaa
caggctaaaaacatggtccctgctcatgtttaa
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integrated database retrieval system
