Clavelina lepadiformis (light-bulb sea squirt): 143461940
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Entry
143461940 CDS
T11416
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04144
Endocytosis
clep04517
IgSF CAM signaling
clep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
143461940
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143461940
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
143461940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143461940
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clep04812
]
143461940
Membrane trafficking [BR:
clep04131
]
Others
Actin-binding proteins
Arp2/3 complex
143461940
Cytoskeleton proteins [BR:
clep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
143461940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
WDR55
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Rax2
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Cyd_oper_YbgE
Motif
Other DBs
NCBI-GeneID:
143461940
NCBI-ProteinID:
XP_076816008
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All DBs
Position
6:279416..280882
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AA seq
366 aa
AA seq
DB search
MTDVFNFGVKPIVCHAWNHDRTQVALSPNNNDVQIYEKSGRKWNLIHTLSEHTLNVTGID
WAPKTNRIVTCGADRNAYVWQLKDGVWCQELVILRINRAATCVRWSPEEDKFAVGSSSRM
ISVCYFEADNNWWVSKHIKKPIRSTIVSLDWHPNNVLLAAGCCDYKAYVFSAYIREINPK
PGPTVWGKKMTFGMLMQEFAMPCTGWVHGVAFSPSGDRLAMVSHGSIVSVAAGGKELVSL
RTEHLPFNSCLWLTEQSMVAGGHDCNPMLFNVDGGCDSVKFVCKMDQPPKDGGAGRTVSA
MSMFKMMDKKGAVEATGTEVETKHKNAIIQIRQFAVNKFSTCGKDGNVVVWDGKSLESAI
AEMKIV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgttttcaactttggcgtcaaacccatcgtgtgtcacgcctggaatcacgac
cgaacgcaggtggctttgagcccaaacaacaacgatgttcagatttatgagaagtccggc
cgcaagtggaacctcatccacactctcagtgagcacaccttgaatgttactgggatcgac
tgggctcccaaaaccaatcgcatcgtgacatgcggtgcagaccggaatgcttacgtgtgg
caacttaaagatggcgtctggtgccaggagcttgtgatcctccgaatcaatcgagccgcg
acctgtgtgcggtggtcgccagaggaagacaagtttgctgtcggaagctcgtcgaggatg
atctcggtttgctattttgaggccgacaacaactggtgggtgagcaagcacattaagaag
ccgatccggtcaacgatcgtttccctcgattggcatccaaacaatgtcctgcttgctgcc
ggatgctgcgactacaaggcgtacgtcttctccgcttacatccgagaaataaatcccaag
ccaggtcccactgtgtggggaaagaagatgacgtttggaatgctgatgcaggagtttgcg
atgccgtgcacgggttgggtgcatggtgtggcgttctctccttcaggagaccgacttgcg
atggtttcccatggcagcatcgtctctgtggctgctggaggcaaagagctcgtctctctt
cgcactgaacacctcccattcaacagttgtctgtggttgaccgagcagagcatggtagct
ggcggccacgactgcaatccaatgcttttcaacgtcgatggtggatgtgactcggtgaaa
tttgtttgcaaaatggatcagccaccaaaggatgggggcgcaggtcgtaccgtgtcggca
atgagcatgttcaagatgatggataagaagggtgctgtggaggcgacaggcacagaggtg
gagacaaagcacaagaacgccatcatccagatcaggcaatttgcggtgaataagttttca
acttgtggcaaggatggaaatgtggtggtgtgggatggaaagtctctggagtctgcaatt
gctgagatgaagattgtctaa
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