Clavelina lepadiformis (light-bulb sea squirt): 143462017
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Entry
143462017 CDS
T11416
Name
(RefSeq) GPI-specific phospholipase A2-like PGAP3 isoform X1
KO
K23553
post-GPI attachment to proteins factor 3
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
clep01100
Metabolic pathways
Module
clep_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
143462017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143462017
Membrane trafficking [BR:
clep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
143462017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Per1
Motif
Other DBs
NCBI-GeneID:
143462017
NCBI-ProteinID:
XP_076816118
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Position
6:12961995..12968120
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AA seq
319 aa
AA seq
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MIYVYYIMGLILLANWCTASIGDKSMIYMVCLQQCERNICHVETLEQTTFYEKFLGWNCF
EECKYSCMWQTVERYKATGRPVPQFYGKWPFLRLFGLQEPASVLFSIFNGVSSIFGFIKY
SRRVPSNAPMHIILSVQIILTINAWLWSTVFHGHDFPWTEKLDYFSATSIVIFSIYVFIH
RVTIGISSLYRVVLRSCFGMTLIIFYVTHIYYLSSIKFDYGYNMIVNIMFGLLGSVAWLC
YCFLVWKRQPYVFKMIACILLTNVFLCLEVFDFPPLFWILDAHSIWHLLTIPLPLLYYSF
FTDDSFFVYSRSEVKNKLQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgtatattacatcatgggactaatccttttggctaactggtgtacagcctcc
attggtgataaatcaatgatatatatggtatgtctccaacaatgtgaacgtaacatatgc
catgtggaaactttggaacagacaacattttatgaaaaatttttaggatggaactgcttt
gaagaatgcaagtattcttgcatgtggcaaacagttgaacgatacaaagcaactggtagg
cctgtaccacaattttatggaaagtggccatttttgagactgtttggacttcaagagcct
gcttctgtgcttttttcaatcttcaacggtgtttcaagtatttttggttttatcaaatat
agcagacgagtcccatcaaatgccccaatgcacatcatcctcagtgtgcaaatcatcttg
accattaatgcttggttatggtctactgtttttcatggtcatgattttccttggacagag
aaattggattatttttctgcaacatcgatagtaatttttagtatatatgtttttatacat
cgagtgacaattggaatttcttctttataccgagtagttttacgttcatgttttggaatg
accttaatcatattttatgtcactcacatttactacttaagttctattaagtttgattat
ggatataacatgattgtaaatataatgtttggtttgctaggttctgttgcatggctttgc
tattgcttcctagtatggaaaagacaaccatatgtatttaaaatgatagcatgcattctt
ttaacaaatgtgtttctgtgtttagaagtatttgattttccaccacttttttggatttta
gatgcacattctatttggcatttgttaactattccattgccccttctgtactattctttt
tttaccgatgattccttttttgtgtactctagatcggaggtaaaaaataagttgcaataa
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