Clavelina lepadiformis (light-bulb sea squirt): 143462190
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Entry
143462190 CDS
T11416
Name
(RefSeq) histone-lysine N-methyltransferase SMYD3-like isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00310
Lysine degradation
clep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
143462190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clep03036
]
143462190
Enzymes [BR:
clep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
143462190
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
143462190
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
143462190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
MYND_ZMYND11_ZMYD8
TPR_10
zf-C6H2
Motif
Other DBs
NCBI-GeneID:
143462190
NCBI-ProteinID:
XP_076816366
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All DBs
Position
6
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AA seq
432 aa
AA seq
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MIEVFRSEDRGRGLRATTDLRKGTLVLTSAPFAYVLSKKQKGIRCDHCLNKQTTLLRCSG
CKYMKYCNRECQKGAWSSHKSECTALKRVEPKIPPDFVILLSRILWKLQKSTDDNWSENL
VSVVDLESNYTLLSDDQKEALGQFVIVMHSYWGQGALPVQVPDIKAVLELCSKIKNNSFA
ISDEEMQADIGTGVYLSCSLLNHSCDPNCVAEFDEMNINIRAIKDISKGEELLISYVDVF
APSEDRQKDLMDIYKFSCRCNLCRTKKHDRSMLQDFKSSMTISKQNSVKDLLHELHNLCD
ARNFQQIYNITSGYVEREYLPVENIYMTKILDFAMDAAIELKMFGRAFQHGAAALHAYRK
YLDESHPLTGLQIMKLGKILLYQEKNEDALQMLLEALKILQITYSKTGIIMQSLTKLVAQ
CQVELRHKNLGE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagtgtttcgttcagaagatagaggaagaggtctgagagctacgactgatctg
cggaaaggcacacttgttttaacttctgcaccatttgcatacgttctgtctaaaaagcaa
aaaggcatcagatgcgatcactgcttaaacaaacaaacaacattgctaagatgttccggg
tgcaagtacatgaaatactgcaaccgtgagtgccagaaaggtgcatggtcttcacacaaa
tcagagtgcacagctctgaagagagtagaaccaaagatacctccagattttgtgatcctg
ttaagcagaattttgtggaaattacagaaatctacagatgacaactggtcagaaaatttg
gtttcagtagttgatttggaatcaaattacaccttgttaagcgatgaccaaaaagaagcc
cttggtcagtttgtcattgtgatgcattcctactgggggcaaggagctttacctgtgcaa
gttcctgatatcaaagcagtgttggaattatgttccaagataaaaaataacagttttgca
atttcggatgaagaaatgcaagctgatattggaactggagtatatttaagttgcagctta
cttaatcacagctgtgaccctaattgtgttgctgagtttgatgaaatgaacattaatatc
agagctataaaagacatctcaaaaggtgaagagttgttgatttcgtatgttgatgtcttc
gcaccctctgaagaccgtcaaaaagatctcatggacatctataaattttcttgtcgttgc
aatctgtgccggacaaagaagcatgacaggagcatgcttcaagattttaaaagttctatg
accatttcaaaacagaattccgtgaaagacttactgcatgagttacataacttatgtgat
gcaagaaatttccaacagatttataacataaccagtggatatgttgagcgcgaatactta
ccagtagaaaacatttacatgacaaagattcttgattttgcaatggacgccgctattgaa
ttaaaaatgtttggcagggcatttcaacatggtgcggctgctctccatgcttacaggaag
tatttagatgagagccatccactgacaggtttgcagataatgaaattgggaaaaatatta
ctatatcaagaaaaaaatgaagacgctctgcaaatgcttttggaggcgttaaaaatcctt
cagatcacctacagtaaaaccgggattattatgcaaagtttaacgaaacttgttgctcaa
tgccaagtggaattacgtcacaaaaatcttggagaataa
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