Clavelina lepadiformis (light-bulb sea squirt): 143462367
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Entry
143462367 CDS
T11416
Name
(RefSeq) LIM/homeobox protein Lhx1-like
KO
K09372
LIM homeobox protein 1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143462367
Transcription factors [BR:
clep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
143462367
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GFIT
Motif
Pfam:
Homeodomain
LIM
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
143462367
NCBI-ProteinID:
XP_076816616
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All DBs
Position
6:16558248..16561424
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AA seq
393 aa
AA seq
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MAVRNKKMELPCASCNDVIKDRYLMEVDKHCWHQSCLKCSDCKGLLQKSCFFREGNFYCL
NDFSRRFGVKCARCNGSLYVSDLVHKIRINDQQKDTYHVNCFSCSFCSCFLSKGSKYLLT
SDGEIVCADDCFKVSNGSDDDTTKTDVAEEKSERYNNKNNHRKDESVAKQNSSENGLEST
GFDDESSFDLSDIQSDQDKQEEKTLVKHTSLPTRDNTKRRGPRTTIKAPQLEVLNAAFEK
QEKPSRHDRERLSKTTSLPMRVIQVWFQNRRSKKRRMKQMSDLNSSRCYFDRSHHFASHD
NRVDISSRYIMDVGNHHHFYPYVQSIPTDNQSSCSGDIFSTRLGSLPLKAKSEPMNTLEM
TLQYPQAHQVNQPAAYHEHFSPESLGSCNYSYV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccgttagaaataagaaaatggagttaccttgcgcttcatgtaacgacgttatcaag
gatcgatatctaatggaagttgataaacattgttggcatcagtcgtgccttaaatgctcg
gactgcaaaggtttattgcaaaaatcctgctttttccgcgaagggaacttttactgttta
aatgacttttcgaggcggtttggtgtaaaatgtgcaagatgtaatggatcgctatacgtt
tctgatcttgtgcacaaaattcgtattaatgaccagcagaaagacacctatcacgtcaat
tgtttctcatgctcgttttgttcgtgttttctttccaaaggatcaaagtatctactaaca
tctgatggagagattgtgtgtgccgacgactgcttcaaagtttcaaacggaagtgatgat
gatacgacgaaaaccgacgtagcagaagagaaatccgaaaggtataataacaagaataac
cacagaaaagatgaaagtgtagcaaagcaaaactcttccgaaaacggcttggaatcaacc
ggattcgatgacgaatcgtcgtttgatcttagcgatattcagtcagatcaggataaacag
gaagaaaaaacattggtcaaacatacgtcacttccgactcgtgataacacaaaacgccgt
ggcccaagaacaaccatcaaagccccacaactagaagttttaaatgctgcctttgaaaag
caggagaagccgagtcgtcatgatcgggaaagactctcaaaaaccacgagcctgccgatg
cgcgtaattcaagtgtggtttcaaaatcggcgcagcaagaagcgtcgtatgaagcagatg
agtgatttgaattcaagccgttgctacttcgatcgaagccaccatttcgccagccatgat
aaccgtgtcgacatctcttcacgttacatcatggatgtcggaaatcaccatcatttctac
ccatacgttcagtctataccaactgacaaccagtcttcttgctcaggtgacatattttcg
acgcggcttggcagcctgccattgaaagcaaaatccgaaccgatgaatacattggagatg
accctacagtatccccaggctcatcaagttaaccaaccagccgcttatcacgagcatttt
agtcctgaaagtttggggtcttgcaactattcctatgtgtag
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