KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143462395
Entry
143462395         CDS       T11416                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143462395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clep03041]
    143462395
Spliceosome [BR:clep03041]
 Complex A
  U2 snRNP components
   U2 related factors
    143462395
 Complex B
    143462395
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C RRM_occluded RRM_7 DUF8489 Transformer
Other DBs
NCBI-GeneID: 143462395
NCBI-ProteinID: XP_076816662
LinkDB
Position
6:complement(1300579..1303184)
AA seq 483 aa
MEPNGQSYPDQSMMAGGGYNSFNQNSFSQQDQQQDGPYIKEEKYSDRSSGRHRDRKRSRD
RERRKRSRSKSRDRSRRHRSRSRDKKRRSRSKERKTTKSKRQYRYWDVPPVGYEHVTPLQ
YKAMQAAGQVPLIASTQILGTSTAASESLQVPVAGSQMTRQARRLYVGNIPFGVTEDAMM
EFFNNQMRISGLAQAPGDPILAVQINLDKNFAFLEFRSVDETSQALAFDGINFMNQALKI
RRPSDYKPLPGSADQPAVHLPGVISTVVQDSQHKIFVGGLPNYLNEDQVKELLTSFGPLR
AFNLVKDSATGLSKGYAFAEYADYLITDQAIAGLNGMQLGEKKLIVQRASVGAKNNPHGA
MLAPVTLQIPGMMQATGAGPPTSVLCLMNMVTVEDLTDDEEYEDILEDVRDECNKLGKVI
SLEIPRPGPGLTEKDGIGKIYVEFASHLDSQKAASALSGRKFANRVVVTSYYDPELYHHR
LFK
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggaacccaatgggcaatcataccccgaccaatccatgatggcaggcggcggctacaac
tctttcaatcaaaactcattctcgcaacaagaccaacaacaagatggcccctatataaaa
gaagagaaatacagtgacagaagttctggtcggcatcgcgatcgtaaacgaagtcgtgat
cgcgaaagaaggaaaagaagtcggagcaaaagcagggatcgtagtcgtaggcaccgttct
cgtagcagagacaaaaaacgacgctccagaagcaaagaacgcaagaccacgaagagcaaa
cgtcaataccgatattgggacgtcccaccggtcggctacgagcatgtgacaccactccag
tacaaagcaatgcaagcagctggacaagttcctctcattgcatcaacacagatactgggc
acatcaactgcagcatctgaatcacttcaagtgcctgtagctggaagtcaaatgactcgg
caagcacgtcggttatatgttggaaacattcctttcggagttacggaggatgcaatgatg
gagttcttcaacaatcagatgaggatatctgggctagctcaagcacctggtgaccctatt
ttagccgttcagataaatctcgataagaactttgctttcttggagttccgatcagtggat
gaaacatcacaagctctggcatttgatggaatcaatttcatgaatcaagcgcttaagatt
cgacgtccaagtgattacaaaccactgccaggatctgcagaccaacctgctgtccatcta
ccaggtgtcatatcaacagtcgttcaggactcccaacacaaaatcttcgtcggcgggctg
ccaaattacttgaatgaagaccaagtcaaggaactcctgacttcgtttggtccccttcgg
gctttcaacttggtcaaagacagtgccacaggtctctcgaagggatatgcatttgctgag
tacgccgattatctaatcacagatcaggccattgctggcctcaatggcatgcagcttgga
gagaagaaattaattgtccagcgagccagtgttggggcgaagaataacccacatggggcc
atgcttgctcctgttaccctgcagattccaggaatgatgcaagcgactggggctgggcct
ccaacttcagtcctgtgtctgatgaacatggtgaccgttgaggatcttacagatgatgag
gaatatgaggacattttggaagatgttcgagatgaatgcaacaagcttggaaaggtcatt
agcttggaaattccaagacctggtcccggcttgactgaaaaggacggcatcggaaaaatc
tacgtcgaattcgcaagccatcttgactcccaaaaggctgctagtgccctctctggtcga
aaatttgccaatcgtgtggttgtgacgtcatattatgatcctgagctgtatcaccataga
ctgttcaagtaa

DBGET integrated database retrieval system