Clavelina lepadiformis (light-bulb sea squirt): 143462546
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Entry
143462546 CDS
T11416
Name
(RefSeq) nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143462546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143462546
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143462546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
143462546
NCBI-ProteinID:
XP_076816873
LinkDB
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Position
6:complement(698690..708111)
Genome browser
AA seq
1394 aa
AA seq
DB search
MAIEMDSSNISPSSQACSGLQDVVAVINKLLLHDRESIDLSAQLGVTSMYSGICSGLKSE
DYPSSDVIEPPLITDVRRVPLPPELVEQFAHMQCNCIIGVFPEIGRAWLTVDSDIFVWRY
ADGDDLAYFDGLSETILSVALVQPKQGIFRDHIKYLLVLTTPLDIVILGVSFAGDDVNNE
MHLLPDPLFSLSSDGVYLLHTVGTDNGRIFTGGKDGCLYEVTYQASGGWFSRKCNKINHS
RSRFSFLLPSVVSVWLNEEDSICQLTVDDTRNILYSRSEKGTITVYDLGSDGQSVGCVAQ
LRLPSIQRRARDIASGVEPSNFNELVYITPITLRESRYLHLVAVTQSGVRLYFMTCQAAT
GDVVKLRPTGIHLVHVRLPPGFTGSSIHRPMSVHSAHYNTGSLLLASSSGDDGILWCINR
DMYAFDKMLRESQCNFGLDGRAWVIAEVATPFSPLTAAVLPAGSTAGLPPNPPIHVVQHI
QRPSEYVIISSQGCHMFNKLRPVDQLRHLLESTSDVESQSVENFFKLYKDGEAGCCCIIL
AMSAVPTDFHIAERATAAFTHHWGIPQVSLQQGVSLTSPMPLRGMSGLEAMSPISLRNPP
QQFNATRTPGGLPVISTPMPGSNPPLLANQSPGTFQSVPTFPDPSSDMYFYTTRQHSVYK
MFARIMRPLWDAKLVEDYVVTEGGKQKSFVVNRIDVEVVSLVLNDLIAFKKFFNKHCTSQ
VQWRESISSDRNVGRNFRRPVEANSVQRDLQKRQLAEVATAELSWMRFLHDLLHKSTEVL
GLWRILLHHQLHVLFESLDKVSQTALKSATFEGFILSGQALCSALISALVGKYLDDNSTI
DALSSQLREVCPALYSPDDAICSKASELLNAVRSVPVSQRIELLEEAVRLFQQVAHSINL
PVVVQQLQAARYYTGVVELCLHAASKRDEEELALKLYKSSLAANDPGVDPGFRKAYLSRV
ECYKCVTDMLDELMLAGESHPQTPSVPTKPGPPQPVQSGSSSSSLGALQAEDARQHADSC
MKLALRSNDELFHVTLYEWMLRKRLPAQLLRVTSPFIESFLQRVAESHEENPTSLGAAGS
DLLWQYYERNGQHVSAASILGNLAEKPGSDRDLSKRIEYLSRARMNAKSVTSVTADSATG
GQLLHELEEKLEVAQIQLETYEQLKELNETDAARTINYSLLDVTQLYREYAEPYQLAEGK
LAIVHCAGLHDPSLVESLWQNIVEHELHKRASSDVTMTASLQHKLIQLGKRYLSSQRYFP
IEFLAGYFEKMSMSRGWSLNWAFTIFLESGLPLVELLDVYGNVHKQKLPCWSEQDDPFRI
LFVINEMLKIFLDQPNNQVPSDRQRRNFVDRSLDALSVHLVQLHSVTSPNESVRALMTEL
RRTQASLQAMQERR
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggctatagagatggatagctcaaacatttcaccttcttcacaagcttgctctggtttg
caagatgttgtcgctgtaatcaacaaacttctgcttcatgatcgagaatcgattgactta
tcagcacagttgggtgtcacatcgatgtattctggtatttgtagcggattaaaaagtgaa
gattacccgagcagtgatgtcatagagcctcctcttataactgatgttcgacgagtgcct
cttccacctgagctcgtcgagcaatttgctcacatgcagtgtaactgtattatcggcgtc
tttcctgaaattggtcgtgcttggctgacggttgactctgatatatttgtatggcgatat
gctgacggtgatgatctggcatatttcgacggattgtcagaaaccattctcagtgtcgca
cttgttcagccaaagcaaggaatattccgagaccacatcaaatacttgcttgtgctcaca
accccactggatattgtcatacttggagttagctttgctggggacgatgttaacaacgag
atgcacctgttgcctgacccactcttctctctctcttctgacggcgtttatctcctgcac
acggtcggcaccgataatggacggatatttaccggcggcaaggatggttgtctctacgaa
gtaacataccaagcgagtggaggctggtttagtagaaaatgcaacaaaataaatcactcg
cggagtcgattttcttttctgcttccgtctgtcgtcagtgtctggttgaatgaagaagat
tcgatttgccagctcaccgtcgatgatacgaggaatattttgtactcgagatcagagaaa
ggaaccatcactgtttatgatctcggcagcgacggtcagagtgtgggatgcgtggcacaa
ctgcggctgccctcaatccagcgaagagcgcgcgacatcgcctctggtgttgaaccttcc
aactttaacgaacttgtttatatcacacccataactttacgagagtcgcgttatctacac
ttggtggcagtaacgcagtcaggagtccgtttatatttcatgacctgccaggcagcgaca
ggagatgtggtaaagttacgaccgacgggtatccaccttgtccatgtgcgacttcctccc
ggttttacggggtcttccatccacagaccgatgtctgttcattccgcgcactacaacaca
ggaagtctgctcttggcatcctcaagtggtgatgatggtatcctgtggtgtatcaaccgt
gatatgtacgcctttgataagatgcttcgtgaaagccagtgtaacttcggccttgacgga
cgagcgtgggtaatagcggaggttgctaccccattctcacccctcacagctgctgttctc
cctgctgggtccactgcgggtttacccccaaaccccccgatccacgtggtccagcacatt
caaagaccatcagaatatgtcatcatctcatcccagggctgtcacatgttcaacaaactt
cgaccggttgatcagttgcgccatttattggaatcaacttctgatgtcgaatctcagagc
gttgaaaatttctttaagctttataaggacggggaagccgggtgttgttgcatcatcctc
gcaatgtccgccgtccccaccgatttccacatcgccgagcgtgccactgctgcgttcacc
caccattggggaatcccccaggtttcactgcagcagggagtttccctcacgtcacccatg
cctctgcgggggatgtccgggttagaagcgatgtcgcccatatctttaagaaatccccca
caacaattcaacgcgacaaggacaccaggtggactgccagtaattagcacccccatgcct
ggcagcaatcccccccttcttgcaaaccagtctccagggacattccagagtgtcccaaca
ttcccggatccttcaagcgatatgtacttttacacaacgagacagcatagtgtttataag
atgtttgctcgaatcatgaggccgttgtgggatgcgaaactggtggaggattatgttgtc
actgaaggtggaaaacagaaatcgtttgttgtcaacaggatcgatgttgaagtcgtgtcc
ctcgttttaaatgatttgatcgcttttaagaaattttttaacaaacattgcacgagtcag
gttcaatggagggagagtatttcatctgatcgtaacgtgggaagaaattttcgtcgtcct
gtagaagctaacagcgtgcagcgagatttacagaagcgccagctcgccgaagttgcaacg
gcggagttatcatggatgcggtttcttcatgatctactccataaatccacggaggtgctt
ggtctgtggaggatcttgctccatcatcaactacatgtcttgttcgagtctcttgataag
gtttctcaaactgctctgaaaagcgccacattcgaaggcttcatattgtcaggacaagct
ctgtgtagtgcgctgatatctgcgttagtcgggaagtacttggacgataattccaccatc
gatgcactgagcagtcaacttcgtgaagtatgcccagccctctactcccccgatgatgca
atttgttccaaggcaagtgagctgctcaacgcggtacgaagcgttccagtttctcagaga
attgaattactcgaagaggcagtgcggttgtttcaacaggttgcgcattcgatcaacctt
cctgtggtcgtgcaacagctgcaagctgctcgctactacacaggagtcgtggagttgtgt
ctccatgccgcatccaagagagacgaggaagaacttgctcttaaactttacaaatcatct
ctcgccgccaacgatccaggagtagatcctggtttcagaaaagcatatttgtcaagggtg
gagtgttacaaatgcgtcactgacatgctcgatgaactgatgttagccggggagagtcac
ccgcaaaccccaagcgtccccaccaagcctggacccccacaacctgtgcaaagcgggtca
agttcaagttcattgggggccctgcaagctgaagatgcacgacagcatgctgactcttgc
atgaaactcgctctcagatccaacgatgaacttttccacgtcaccttgtacgaatggatg
ctccggaagaggctccctgctcaactactacgagtgacgtcaccattcattgaatccttc
cttcagagggtagcagagagccatgaggagaatccgacatccctgggagctgcaggtagt
gacctcttgtggcagtattatgagcgcaacggacaacacgtgtcggccgcctccatactg
ggcaacctcgccgagaaaccaggtagcgacagggacctttcaaagcgcatcgaatatctt
tcaagagccaggatgaacgcaaagagcgtcacctccgtcactgctgactccgccactgga
gggcagcttttacacgagcttgaggaaaagttggaggtggcccagatacagctggagacc
tacgagcagttgaaggaactgaacgaaaccgacgcagcccggaccatcaattacagcttg
cttgacgtcacgcagttatacagagaatatgcggaaccataccagctggctgagggcaag
ttggcgatagttcattgcgccggtttgcacgacccgtccttagtagaatctctgtggcag
aacatcgttgaacacgagctacacaagcgtgcgtcatcagatgtcaccatgacagcgagc
ttacaacacaagttaatccaactcggcaagcgctatttgtcgtcacagcggtacttcccc
atagaatttctggcgggatattttgagaagatgtctatgtcgaggggctggagtttgaac
tgggcgttcaccattttcctcgaatccggtctcccgcttgttgagttacttgatgtctat
gggaacgtgcacaagcagaagcttccatgctggtcggagcaggacgacccgttccgaatc
ctcttcgtgatcaacgagatgttgaagatcttcctcgatcagcccaacaaccaagtcccc
tcagaccgacagaggcggaactttgtggatcgctcattggacgccctttccgttcatctc
gtccaattacattccgttacgtcaccaaacgagagcgtccgcgctttgatgaccgaattg
agacgtacccaggcaagtttgcaggcgatgcaagaacgacgatga
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