Clavelina lepadiformis (light-bulb sea squirt): 143462965
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Entry
143462965 CDS
T11416
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clep03009
]
143462965
Enzymes [BR:
clep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
143462965
Ribosome biogenesis [BR:
clep03009
]
Eukaryotic type
Other ribosome biogenesis factors
143462965
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GFIT
Other DBs
NCBI-GeneID:
143462965
NCBI-ProteinID:
XP_076817409
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Position
6:16341027..16343790
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AA seq
456 aa
AA seq
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MALYRVGEVVLSKALKQKGSVKNLVFASKYRNVKELYALVCETLKYSEVLDEIFVSSKFF
KHCKGLSKPLAKLLVYDFLFGKGIQCSGKYKRAVMANKSSLQSTLARIKMKKKIITNAEL
ITDPIANVKIPKYLRVNTLKTTLKSVTNCLKSEGYNLFEGNWKKMGIKEFKIDEHIDNLL
VFNDKVNFHKHDLYLNGHLIFQDKASCIPAQVLNPQSNQTVIDACAAPGNKTSHLSSLMN
NTGTIYAFDLDLKRIRTMKTLLDRAGVANCEVTQSNFLHVKKDDLKYKDVRYILVDPSCS
GSGMVQRLSHLTDNAESSSDKRLSSLSKFQLQVLNHALSFPQVERVAYSTCSIHDIENED
VVKQALANNSKFKLVKCLPTWTRRGHALKGFTDEAEMCVRCQPELDGTNGFFIALFERTQ
SSVICPAEHVQAKLIRPRKRKPRKSNGKTDSNKIKV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctttatatagagttggagaagtagttctgtcaaaagcccttaagcaaaagggttcc
gtcaaaaatctggtatttgcatcaaaatacagaaatgtgaaagaattatatgctcttgtt
tgtgagaccttaaaatattctgaagtacttgatgaaatttttgtgtctagtaagtttttc
aaacactgcaaagggctcagcaaaccactagcaaaattgcttgtgtatgattttttgttt
ggcaaaggtatacaatgttctggaaaatacaaaagagcagtaatggcgaataagtcttca
ttgcaatccaccctggcaagaatcaaaatgaaaaagaaaattattaccaatgctgaacta
attactgatccaatagcaaacgttaaaattccaaaatatctccgtgtaaatactttaaaa
acaactcttaaatctgtgactaactgcctaaaaagtgagggttacaacttatttgaagga
aactggaagaaaatgggtatcaaagaattcaagattgacgaacacattgataacttgctt
gttttcaatgataaagtgaattttcataaacacgatttgtacttaaatggtcatttaatt
ttccaagacaaagcgagttgcattccagcacaagttctaaacccacagtcaaatcaaact
gtaattgatgcttgtgcagcccctggaaacaaaacttctcatttatcttcactgatgaac
aacactggaacaatttatgcatttgatctggatttgaaacgaatcagaactatgaaaact
ttgttggatagagctggtgttgctaattgtgaagtaacacaatctaacttcttgcacgtt
aaaaaagatgaccttaagtacaaggatgtgagatacattcttgttgatccttcctgctca
ggatcagggatggtgcagcggttgtcacatttgactgataatgcagagagctccagtgat
aaacgtttgtcttcattatcaaagttccaactccaggttttgaatcatgccctgtcattt
ccccaagtagaaagagttgcgtattcaacttgttctattcatgacatcgaaaatgaagac
gtagtgaagcaagcactggcaaataacagcaaattcaaacttgtcaaatgtttacctacc
tggactagaagaggccacgctcttaaaggatttactgacgaagcagaaatgtgtgtcaga
tgtcagccggagctggatggaaccaatggattttttattgctttgtttgaaagaactcaa
tcctctgttatttgtcctgctgaacatgttcaagctaaactgattaggccgagaaaaaga
aagccaagaaaaagcaatggcaaaacagacagtaataaaataaaggtttga
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