Clavelina lepadiformis (light-bulb sea squirt): 143462980
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Entry
143462980 CDS
T11416
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143462980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143462980
Membrane trafficking [BR:
clep04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
143462980
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF5616
CobT_C
Motif
Other DBs
NCBI-GeneID:
143462980
NCBI-ProteinID:
XP_076817430
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Position
6
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AA seq
548 aa
AA seq
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MDVVLAVKNYVSRMITDAGPGMKVLLMDRETTGIVSMVYAKSEILQQEVYLFETIDSMHR
DEMRHVKVISFLRPTQENIQLLCQELKSPRYGKYYLYFSHAVSKSDVKLLAESDENECVC
DIHEFFADYYPIDSNHFTLNLPKCSRHFMWKPSDLTRACHGLTAVLLALKKCPMIRYQVN
SDMCCQLADSVKSLISREASLFDFRRADSTPILLILDRRNDSISPLLNQWTYQAMTHELL
GIKNSRVDLSKVPGISKDLNEVVLSPLQDQFYCENLYKNFGEIGASIKGLMEEFQAKTRS
QQKVESIEDMKAFVENYPQFKKMSGTVAKHVTVVGELSRIVSARNLLEISECEQDVACQS
DHSNALQRVRELLKKPTTNPLDALRLVALYSLRYEAHANNATTSLMDQLSSVDGRKIISA
IMKYGSIGKRTNHANDFPGAISMTKKFFKGMKGVENVYTQHIPKIKDILDDLLKGKLKEA
NYPYAGASVMSDRPGDVIVFIVGGTTYEEVACIAAYNADNPGVRVVLGGTTVHNCSSFID
EVRSACAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgtgctggctgttaagaattatgtgtcccggatgatcacggatgctggtccc
gggatgaaagtgctcctgatggaccgagaaacgacggggattgtgagcatggtctatgca
aagtccgagattctccagcaggaagtctacctttttgaaacgatcgattcgatgcaccgg
gacgaaatgagacacgttaaagtgatctcttttctccgacctacccaggaaaatattcaa
ctgctttgtcaagagttaaagtcgccaagatacgggaaatattatctctacttcagtcat
gcagtgagcaagagcgacgtaaaacttcttgccgagagtgatgagaatgaatgcgtttgc
gacattcacgagtttttcgctgattattacccgattgactcaaatcatttcactttgaat
ttgccaaaatgttcacgccacttcatgtggaagccgtctgacctgacccgagcttgccac
ggcctcacagctgtgctgctggcactcaagaagtgtccgatgatccggtaccaagttaac
tccgatatgtgttgtcagttggcagacagcgttaagtcgttgatatctcgtgaagcgtca
ctctttgatttccgtcgtgctgactcaacaccaatcttgctcattctcgatcgtcgcaat
gactcgatttcaccgctgttaaaccagtggacctatcaagcgatgactcatgaattactc
ggcattaaaaatagtcgagtcgatctttcaaaagttccaggaatttcaaaagatctcaac
gaagtggtgctttccccattgcaagaccagttttattgtgaaaatttgtacaaaaacttt
ggtgagattggcgccagtatcaagggccttatggaggagttccaagctaagaccaggagt
cagcagaaagtggaatccattgaagacatgaaagcgtttgtcgagaattacccccagttt
aagaagatgtccggcacggtggcaaagcacgtcactgtagttggagaactctctcgtatt
gtctcggcaagaaacctgctcgagatatcggaatgtgaacaagatgttgcgtgccagagt
gaccactcaaacgccttgcagcgtgtgagagagctgttaaagaagccgacaaccaaccca
ttggatgcccttcgacttgttgctctatactcccttcgttacgaggctcatgctaacaat
gcgacaacttcactcatggatcaactctcatcagtggatgggcggaagatcatatcggcg
atcatgaagtatggctcgatcgggaagcggacgaaccacgcaaatgactttccaggagca
atctcgatgacaaagaagtttttcaaaggcatgaaaggagttgagaatgtttacacccaa
catattcccaagatcaaagacattctcgatgatttgttgaaagggaaactaaaagaagca
aattatccttatgctggagcttctgtgatgtcggacagacctggtgatgtcatagtgttt
atagtgggtggcaccacttacgaggaagtcgcgtgcatcgcggcttataacgctgacaac
ccgggggttcgagtcgtgttgggaggcaccactgttcataattgttcgtcttttatagac
gaagtacgatctgcgtgtgctgcgtaa
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