Clavelina lepadiformis (light-bulb sea squirt): 143463005
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Entry
143463005 CDS
T11416
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143463005
03036 Chromosome and associated proteins [BR:
clep03036
]
143463005
Transcription factors [BR:
clep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
143463005
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
143463005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
YABBY
Dehydratase_LU
Motif
Other DBs
NCBI-GeneID:
143463005
NCBI-ProteinID:
XP_076817468
LinkDB
All DBs
Position
6:19057894..19064997
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AA seq
718 aa
AA seq
DB search
MAMNGELLDFKDIFQESRGAMLDGRLQILSEKFVFKNNKTGKIDTIANSDVSGIVWRRVA
RDNELKLTLKNGHIFKFDGFKDKEFERINSFVKSRYGMEVEQQELSGKGWNWGSVDFQGY
EMQFDVGSKLSFEIPLSNVSQCTQSKDEVALEFHQNDDSELSLMEMRFYIPPSQDDSVDK
VKEFHESVMAKADVLQVKGNAICIFQDLQCLTPRGRYDIRMYPKFIQLHGKTFDYKITYT
SILRLFLLPHKDQRQIFFVVSLDPPLKQGQTRYHFLILLFYKEDDLFAELTLSDEEIEER
FDGKLQKTMSGPMYEVVSRVVKHLVQRKITVPGSYKGVGGVQSITCTYKASSGFLYPLER
GFMYVHKPPVHIRFDEIATVNFARGTTKINRSFDFEVETRSKGNYVFSNIERDQYAALYD
FVSNKKLKIKNIGKGGINYDTMQESDDDDVHDPYMERMKQEAAARDEEDNDDDEESEDED
FQPTEQNENDVAEEFDSDAESSEEDESGKEEEDSEEEQRPKKRPKEKKVVKERAPKETGS
RKRKAKKDPNAPKRPPSAYLQWLNDNRAKLKHENPGISITELSKLAGQQWSKVDRSVKEK
YEQKYRKAKEVYEVSMREYKQSGGASTTSPPVKKSKSKPSSQNTGKVTTNTTPTKYKSKE
FITESDSLSSSDSEEETKPKSSSKKAPPSPQADSEEESEAEQTPASSSEEEDEDDDSD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaatggtgaattgctggattttaaggacatttttcaagaaagtcgtggagca
atgctcgatggcagactccaaatcctcagcgaaaagtttgtctttaaaaacaacaagacc
ggtaagatcgatacgatagcaaacagcgacgtgtctggtattgtttggaggagggtagca
cgagataatgaactgaaactaactttgaaaaatggtcacatcttcaaatttgacggattt
aaagacaaggaatttgaaaggataaacagtttcgtcaagtccagatatgggatggaggtt
gagcaacaagaactgagtggaaaaggctggaactggggcagtgttgactttcaaggctat
gaaatgcaattcgacgttggttcaaaattatcatttgaaattccgctctcaaacgtatcc
cagtgtactcagagcaaagacgaagtggcgttggaatttcaccagaatgatgactccgag
ctttctttaatggagatgcgtttctacattcctccttcacaggacgacagtgttgataaa
gtgaaggaattccatgaaagcgtcatggcgaaggccgatgttctccaagtaaaaggaaat
gccatttgtatattccaagacctgcaatgtctcacaccaagaggtcgatatgacattcga
atgtacccaaagtttattcaacttcacggcaagacgtttgactacaaaatcacgtacacc
tcaattttaagactgtttcttcttcctcacaaagaccagcgccagattttttttgtggtt
agtcttgatcctccgctgaaacaaggccagacacgatatcattttcttattcttctcttt
tataaagaagacgacctttttgccgagttgactctttctgacgaagagatagaagagcgc
tttgatggaaagctacaaaaaacgatgtctgggccaatgtacgaagtggtcagtcgtgta
gtgaaacacttggtgcaacggaaaataactgtcccaggttcatataaaggagttggtggc
gttcagtcaatcacgtgcacttacaaagcatcatctggatttttgtacccccttgagcga
ggctttatgtatgtgcacaagccacccgtacatattcgatttgatgaaatagcgaccgtg
aactttgcaagaggaacgacaaaaatcaacagatcgtttgattttgaagttgaaacacga
agcaaaggaaattatgtcttcagcaatatcgaaagagaccagtacgccgcgttgtatgat
tttgtgagcaacaagaaattaaagataaagaatattggaaagggtggaatcaactacgac
acgatgcaagaaagtgacgatgatgacgtccatgacccatatatggaacgcatgaaacag
gaggcggcggctcgagatgaggaagacaatgacgatgacgaagaaagtgaggatgaggac
ttccaaccgacggaacaaaacgaaaacgatgtcgccgaggaatttgattctgatgctgag
agctcggaggaagacgagtcaggaaaagaagaagaagattcggaagaagaacaaagacct
aagaagcgaccaaaagagaagaaggtggtaaaagagagggcacctaaagaaactggatca
agaaagcgcaaggcaaagaaagatccgaatgcaccaaagcgacccccatcagcatacctg
cagtggcttaacgacaaccgggcaaaacttaaacatgaaaatcccggtatcagcataaca
gaactttccaaactggcaggacaacagtggagcaaagtggaccgtagtgttaaagagaaa
tatgaacagaagtataggaaggccaaagaagtatatgaagtgtctatgcgtgagtataag
caaagtggtggtgccagcactacatctccaccggtcaaaaaatctaagtcaaagccgtct
agtcagaatacaggaaaagtgacgactaacacaacgccaactaagtataaaagtaaagag
tttattactgagagtgattctctttcttcatcggattccgaagaggaaacaaaaccaaaa
tcatcgtcaaagaaggctcctccttctccacaagctgacagcgaggaggaaagtgaagca
gaacaaactcctgcttcttcctctgaagaagaagatgaagacgatgacagtgattag
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