KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143463276
Entry
143463276         CDS       T11416                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143463276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clep03041]
    143463276
   03032 DNA replication proteins [BR:clep03032]
    143463276
Spliceosome [BR:clep03041]
 Complex A
  U1 snRNP components
   Sm proteins
    143463276
  U2 snRNP components
    143463276
 Complex B
  U1 snRNP components
    143463276
  U4/U6.U5 tri-snRNP components
    143463276
 Complex C
  U2 snRNP components
    143463276
DNA replication proteins [BR:clep03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     143463276
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 143463276
NCBI-ProteinID: XP_076817833
LinkDB
Position
6
AA seq 116 aa
MASKPKSEMSYDELEAMEKEEFQTGPLSVLTDSVKNNTQILINCRNNRKLLARVKAFDRH
CNMVLENIKEMWTETPKSGKGKKKQQPVNRDRFISKMFLRGDSVIIILKNPLATQS
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcttcaaaaccaaagagtgagatgagttacgatgaactggaagcgatggaaaaggaa
gagtttcaaaccggtccattgtcagtgttgacagattctgttaagaacaacactcagatt
ttgataaactgccgtaacaatcgtaagcttctggctagagtaaaagcgttcgatcgtcac
tgcaacatggtgcttgaaaacatcaaggagatgtggaccgagacgccaaagtccggcaag
ggcaagaagaagcaacaaccagttaatcgagatcgtttcatcagcaagatgtttctccgc
ggtgattcggttatcatcattttgaagaatcctctagccacacagtcataa

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