Clavelina lepadiformis (light-bulb sea squirt): 143463380
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Entry
143463380 CDS
T11416
Name
(RefSeq) LOW QUALITY PROTEIN: T-box-containing protein 2-like
KO
K10180
T-box protein 6
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143463380
03019 Messenger RNA biogenesis [BR:
clep03019
]
143463380
Transcription factors [BR:
clep03000
]
Eukaryotic type
Other transcription factors
T-box
143463380
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
143463380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T-box
Beta-prop_IFT122_1st
DUF3340
Motif
Other DBs
NCBI-GeneID:
143463380
NCBI-ProteinID:
XP_076817964
LinkDB
All DBs
Position
6:16810750..16812278
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AA seq
309 aa
AA seq
DB search
MIVTKGGRRMFPGYRVQFSGMDPNAQYCVLMEMSRLDEHRYKFQNGQWNIAGKGEPHVPK
TFFLHPNSPTRGQFWTNEVVSFHKVKLSNYCGNPDKGKPRIHVVRTDDVSNIHFQRITSF
SFQQTEFMTVTTYQNQEATKFKVQNNPFARGFRPDGGKTKTAMRASSISLHETKRKEQST
QQRNEETAERHQILRKDPRITSSAQSINFEPQYQAFHAAPPAPINEFNFSQSESSTATSM
ELNQPAPCYNSRAEALRLAALETNNFSAPVASLEGWNLAVPSQYDSNQATFENSTYLSST
LMAHLLFLR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttacaaaaggcggaaggagaatgttccctggatatcgagttcagttttctggt
atggacccaaacgcacaatattgtgttttaatggaaatgtccagacttgatgagcacaga
tacaaatttcagaatggccaatggaatatagctggtaaaggcgaaccacacgttcctaaa
acattttttctgcatccaaactcaccaacaagaggacagttttggacgaatgaagtcgtc
tcttttcataaagtgaagctgtcaaactattgcggaaatccagataagggaaagccacgt
attcacgttgtacggactgatgacgtcagcaatattcattttcaacggataaccagtttc
agttttcagcaaactgagttcatgactgtaacaacttatcaaaatcaagaagcaacaaag
tttaaagtgcagaacaatccatttgcaaggggatttcgtcctgacggtggtaaaacaaaa
actgcaatgagggcttccagcatatcattacatgaaaccaaacgaaaggaacaatccaca
caacagcgaaacgaagaaacggctgaaaggcaccaaattttacgaaaagatcctcgtatc
actagctctgcccagtcaataaattttgaaccacaataccaagctttccatgctgcgcct
ccagctccaataaatgaatttaacttttcacagtcggagtcctcgactgcgacatcaatg
gaattgaatcagccagcaccttgctataactccagagcggaagcattgcgtttagctgcc
cttgaaacaaacaatttcagtgcaccggtcgcatcacttgaaggatggaatttagcggtt
ccatcacaatatgattccaatcaagcaacatttgagaacagtacatatctgtctagtact
ctaatggcacatcttttgtttctacgatga
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