Clavelina lepadiformis (light-bulb sea squirt): 143464448
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Entry
143464448 CDS
T11416
Name
(RefSeq) mRNA-capping enzyme-like
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143464448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143464448
Enzymes [BR:
clep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
143464448
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
143464448
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
143464448
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GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
143464448
NCBI-ProteinID:
XP_076818332
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All DBs
Position
7:10885594..10891527
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AA seq
599 aa
AA seq
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MSVPPRWLHCPRKGSLVGGKFLPFKTPLGSRYDKDVPEECRFNPEMLLMYLTGLRVKMSV
IIDLTNTTRFYDKNVFADQGIIHQKISCRGHGECPDPQSTKLFVDLCDRMIRQDPLSVIG
VHCTHGYNRTGFLICSYLIEKLDWSVEAAFSAFSQARPPGIIKGHYIEELFTRYGNREDA
PPPPPLPTWHTECDDSNIDDDGNDVNCNQQREVAANVKRKTFMEDFEIPGIDQVATQPTL
HQVQQIVQRMCGWKKKGFPGSQPVSMDRKNLQLLAQKPYMVSWKADGGRYLMLLNGKDQV
YMVDRDNAVFKVPNLEFPHRKDLNNSLGDTLLDGEMIIDMVNGEKVPRFLIYDIIKYAGQ
PVGDCDFQRRLQCIDKEIVGPRHEKMRQGLIDKRREPFSVRKKEFWDIQQARQILDGKFS
SMVSHEVDGLIFQPAGTNPIDAYKPGRCDEVLKWKPATHNSVDFRLKIQTMQGVGIVPKP
QGLLYVGQLDKPFSEMKVTRELKQYNNKIIECTNTGGQWKFMRERTDKSFPNSYTTAVAV
CESIQHPVTKEMLFDVIERHSYGVQMRHAANSSQNNASRKRNRAGEFLAPDAPPPRKSF
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgccgccaagatggcttcattgtccacgtaaagggagccttgttggaggaaaa
tttttgccttttaaaacacctttaggaagtagatatgacaaagatgttccggaagaatgc
agatttaacccagagatgcttctaatgtatttaacggggttacgtgtaaagatgtcagtt
attattgatttaaccaacacaactaggttttatgataagaacgtatttgcagatcaaggc
ataatacatcaaaaaatttcatgccgaggacatggagaatgtcctgatcctcagtcaaca
aagctttttgtagatttgtgtgacagaatgatccgtcaggacccactatcagtaattggg
gtccactgcacccatggttataacagaacgggctttcttatatgctcataccttattgaa
aagcttgactggagcgtcgaggcagcattttcagcattctcacaagcacgtcccccaggc
ataattaagggccattacatagaagaactttttacccgttatgggaatcgagaggatgca
ccacctcctccacccctgccaacctggcacactgaatgcgacgattcaaatattgatgat
gatggcaatgatgtcaactgcaatcagcaaagagaagttgctgccaatgtcaaacgcaaa
acgtttatggaggattttgaaattcctggaatagatcaagttgcaacgcaaccaacatta
caccaagtccaacaaattgttcaaaggatgtgtggatggaaaaagaaaggctttccaggc
tcacaacctgtgtccatggatagaaaaaatttgcagctgttagcccagaagccatatatg
gtaagctggaaggctgatggaggcaggtatctgatgctcttaaatggaaaggatcaagta
tatatggtggatagagacaatgctgttttcaaggtgccaaatttagagtttcctcatcga
aaagatttaaataactcactgggagatactcttcttgatggtgaaatgattattgacatg
gttaatggtgaaaaagttccccggtttctcatttatgatataatcaagtatgctggtcaa
ccagttggtgactgtgattttcagcgtcgtttgcaatgcattgacaaagaaattgttggt
ccacgtcatgaaaaaatgcgccaaggattaattgataagcggagggagcctttcagtgtc
cgaaagaaagagttttgggatatacagcaagcaagacagatcttggatggaaaattcagt
agtatggtttcacatgaagtggatggtttaattttccaaccagctggcacaaatcctatt
gatgcatacaaacctggacgttgtgatgaagtgttaaaatggaaaccggccactcacaac
agtgtcgattttagactcaaaatccaaactatgcaaggtgttggcattgtaccaaaacca
caagggctgctgtatgttggccagttagacaaacctttttctgaaatgaaggtgacaaga
gaactaaaacaatacaataacaaaatcattgagtgcacaaataccggtggtcaatggaag
tttatgcgggaacgtactgacaaaagctttcctaattcctatacaactgccgtcgctgta
tgtgaaagtattcaacatccagtgactaaagaaatgctttttgatgtaattgaaaggcat
tcatatggtgttcaaatgaggcatgcggccaactcaagtcaaaacaatgcatcgaggaaa
agaaatcgagctggagaattcttggctcctgatgcaccacctcctaggaagtccttttag
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