Clavelina lepadiformis (light-bulb sea squirt): 143464520
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Entry
143464520 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143464520
KO
K09093
aryl hydrocarbon receptor
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143464520
Transcription factors [BR:
clep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
143464520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_NPAS4
bHLH_HIF1A
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
143464520
NCBI-ProteinID:
XP_076818439
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All DBs
Position
7
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AA seq
961 aa
AA seq
DB search
MSATMQVGGAGAQYANRKRRRPQAKKNKDAEKENAQSNPSKRHRDRLNIELDNVAKLIPF
PDEVLNKLDKLSTLRLAVAYLRNKNYHASETGGGNEIENEYMQLMQNQHKELTCFKESES
KLVLQALHGFLIVVTQDYNIFYVTETIQDYLGFPQCDIMNLSMLDLIHAEDREIFRRNMQ
IHPQYTPPDAPQEGDPPTMPEYAKIGMDQDMFRQLAQDGLLHRSFICRLRCLLDNSSGFL
ALHFTGHLRIVRGQNKKNEAKVPLPPETAMFLLASPLQSPSILEIRTKNLIFRTKHKLDY
APLGIDARGRSVLGYTEEQLRQRSGYEFIHSADMMHCADAHTKLMRKGESGLTVFRLLHK
NNNWVWVTASARIVLRNGRPEYIIATQRPILDQEGEEHMKKRANAFRFDFTGQAVLYGEV
NPIGTKGGPENNPLNESEPASKRIRMSNNEAVHQEQLDRSTLYGAQSMQRLDIYIGSMPN
HPTNIYANSGITASAAAVDELLGNDQIISDTGPLTNESDIHFYPLGTDNAVNQTANLGQN
FEDNDGACAFQNMSGLDMAHMNSGQQYQVNNITMAQASQPCMDNSPTGYREGNQMKQEPP
RLYHPPADGNPFPNQPTNQQTQRQTSWKQQQPMTVSPSMGKHMPKISPSVGKQMPMSNSS
HMKNTVHGQTTVNPGLTKSENIMFQNQEVFPEYNPNYQMTQGVPLNQRTVQTLQFGKQHP
NASAASREASDALRHQQHVDSIGFMEPMQQYGNNRNYQQPSVIQSLTIKSMITDKKTMNT
IPTVTSGNPNVQNYPINKHPDSDWNKVEFVGCQDNSIQFDLNKIATDYQTTDPMSKVEDY
LKDHPAEALAIASGVLPQENMPKLSTDKVQAYMMRCQYPQQQHPTNNSHQAQFMNAGMPQ
NTGKNIMNQSFMTQQQQQQYMENSNQVSPMSNGHASNKLMSVSSFTDSDSSITGNLFQGS
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaacaatgcaagtcggaggagcgggcgcccaatatgcgaacagaaagcgaaga
cgacctcaagcaaaaaaaaacaaagatgcagaaaaagagaatgcccaatcaaatcctagc
aaaagacatcgagatcgtctcaatatagagctggataatgtggctaaacttattccattt
cctgatgaggtcctcaataaactggataaactttcaactctacgcctggcggtggcgtat
ttaagaaataaaaactatcatgcgtcggaaaccggaggaggaaatgagatagaaaacgaa
tatatgcaacttatgcagaatcaacacaaggaactgacatgtttcaaggaaagtgaaagc
aagctggtcttgcaggcgctgcatggatttctcatagtagttacacaagactacaacata
ttttacgtaaccgaaacaatacaggattatcttgggtttccacagtgcgatatcatgaac
ttgtcaatgctggacttgattcatgctgaagatcgagagatatttcggcgaaacatgcaa
atccatcctcaatacacaccacctgatgcaccacaagaaggcgaccctccaacaatgcca
gaatatgccaaaataggaatggatcaagacatgttcagacagctagctcaagatggcttg
cttcatcgttcatttatttgtcgcctcagatgtttattggacaactcttccggatttttg
gcccttcactttactggtcaccttcgtattgtacggggacaaaacaaaaagaacgaggca
aaggttccactgcctccagagactgcaatgtttctccttgcatcccctctccaatctcca
tcgattttggagatcaggacaaagaatttaattttccgaaccaagcataaacttgattac
gcaccacttggcattgatgccagagggagatcagtgttggggtacactgaggaacagctt
agacagagatcaggatatgagtttattcattctgcagatatgatgcattgtgctgatgcc
catacaaaattaatgcgaaaaggtgaaagtggtcttactgtattccgactgctgcacaag
aacaacaactgggtatgggtgactgcttcggcaagaatcgtgcttcgaaatggacgccca
gagtatatcattgcgacacaaagaccaattctagatcaagaaggtgaggagcacatgaaa
aaacgagccaatgcctttcgtttcgatttcactggacaagctgttttgtatggtgaggta
aaccccattggaacaaaaggtggccctgaaaataacccccttaatgagtcggaacctgca
agtaagagaattcggatgtcaaataatgaagcagtacaccaagagcaacttgacagaagt
acattgtatggtgctcaatccatgcaaagactggatatttatattggaagtatgccaaac
catcccactaatatttatgcaaacagtggtattacagcttcagcagccgctgttgatgaa
ctattaggaaatgatcaaatcatttctgatactggtccacttacaaacgaatctgacata
cacttctatcctctgggaacagataatgctgtaaatcaaactgctaacttggggcaaaac
tttgaagacaatgacggtgcttgcgctttccaaaacatgtcaggacttgatatggcacat
atgaacagtggacaacagtaccaggtaaataacattacgatggcacaagcttctcaacca
tgtatggataacagcccaacaggatatcgagaaggcaaccaaatgaagcaggaaccacca
agattgtatcacccccctgcagatggtaatccctttcccaaccaaccaaccaaccaacag
acacaaagacaaacgagctggaaacagcaacagcccatgacagtcagtccatcaatggga
aagcatatgccaaaaatttctccatctgtaggaaagcaaatgcccatgagtaactcttcg
catatgaaaaatacagtgcatggtcagacaacggttaatcctggtctaacaaaatctgaa
aacatcatgttccaaaatcaggaagtctttccagagtacaaccccaactatcaaatgacg
caaggtgttcctttaaatcagagaactgtgcaaacactgcagtttggaaagcagcatccc
aatgcttctgcagccagtagagaagcttcagatgctttaagacatcagcaacacgttgat
agcatcggttttatggaacccatgcagcaatatggtaacaatagaaattaccaacagcct
tctgtgattcagtcattgacaataaaatcaatgattaccgacaaaaagacaatgaatact
atacctacagtcaccagtggaaacccaaatgtacagaactacccaatcaacaaacatcct
gatagtgactggaacaaagtggaatttgttggttgccaggacaacagcatacaatttgac
ttaaataaaattgctaccgactaccagacaactgatccaatgtctaaagttgaagattat
ttgaaagatcacccagctgaagccctggcaattgcatctggagtgctgccacaagaaaat
atgccaaaactgtctacggataaagttcaagcctatatgatgcgttgccagtatccacag
caacaacatcccacgaataattcacaccaagctcagtttatgaacgctggtatgccacaa
aatactggaaaaaacatcatgaaccagtcctttatgacacagcagcagcaacaacaatac
atggaaaactctaaccaagtgtcccccatgtctaatggccacgcttccaataaattaatg
tctgtttcgagtttcacagattcagatagttctattacaggcaatttatttcagggatca
ggttaa
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